[Wien] lapw2 message
David Zhang Jing Dong
zjdong at hkusua.hku.hk
Tue Mar 23 03:18:20 CET 2004
Dear Griselda,
Possibly, I got the same problem with you when I run the parallel
program. First, I am trying to modify those perl files whose job is in
charge of data retrieving and storing.
Exec/para.pl
$umps = qx( cd $DIR;cp $infile . );
./SRC_templates/case.struct
It seems we need to change the case.struct in the following email content on
the wien2k forum.
Dear Prof. Blaha
I again downloaded 03 version today and recompiled on AIX.
SUMPARA still gives the same error.
Segmentation fault (core dumped)
** LAPW2 crashed!
there are no other error files/content produced that I can report to you.
I checked the terminal output it shows:
__________________________________________________________________________
STOP LAPW2 END
1525-097 A READ statement using decimal base input found the invalid digit
':' in the input file.
The program will recover by assuming a zero in its place.
1525-097 A READ statement using decimal base input found the invalid digit
':' in the input file.
The program will recover by assuming a zero in its place.
cp: .in.tmp: A file or directory in the path name does not exist.
rm: .in.tmp: A file or directory in the path name does not exist.
rm: .in.tmp1: A file or directory in the path name does not exist.
_____________________________
It is a new case with case.struct
changed to 03 format by 100atomfix_struct case.struct and rest of
the execution by 03 scripts and executable. sumpara executable is produced
without any error(I checked compile.msg file).
If you wish to check whether I have wrong struct file I can send it to
your personal ID.Pl. let me know.but I am sure as the struct file
is consistent with the format you mentioned in one of your last mail.
same case with 02 has no problem at all.
I tested sumpara of 02 version for the above case instead of
sumpara of 03. now sumpara is executed smoothly(I could complete 4
iteration):
:log file:
Tue Jan 28 11:42:48 CST 2003> (x) lapw0 -p
Tue Jan 28 11:43:14 CST 2003> (x) lapw1 -c -up -p
Tue Jan 28 11:43:52 CST 2003> (x) lapw1 -c -dn -p
Tue Jan 28 11:44:29 CST 2003> (x) lapw2 -c -up -p
Tue Jan 28 11:44:38 CST 2003> (x) sumpara -up -d
Tue Jan 28 11:44:38 CST 2003> (x) sumpara_vresp -up -d
Tue Jan 28 11:44:38 CST 2003> (x) lapw2 -c -dn -p
Tue Jan 28 11:44:47 CST 2003> (x) sumpara -dn -d
Tue Jan 28 11:44:47 CST 2003> (x) sumpara_vresp -dn -d
Tue Jan 28 11:44:47 CST 2003> (x) lcore -up
Tue Jan 28 11:44:47 CST 2003> (x) lcore -dn
Tue Jan 28 11:44:48 CST 2003> (x) mixer
_______________________________________
but the terminal output has the message and no error:
____________________________________
STOP CORE END
1525-097 A READ statement using decimal base input found the invalid digit
':' in the input file.
The program will recover by assuming a zero in its place.
1525-097 A READ statement using decimal base input found the invalid digit
':' in the input file.
STOP MIXER END
in cycle 4 ETEST: 50060.0807925000000000 CTEST: 1.2151623
hup: Command not found.
STOP LAPW0 END
________________________
I checked in the case.scf file. the Atom lables are 001 instead of 01.
Pl let me know what could be wrong?
Regards
Sahu
The following is my error message:
Calculating TiC in /home/zjdong/wien2k/TiC
on hpcpower.hku.hk
start (Tue Mar 23 00:28:21 HKT 2004) with lapw0 (20/20 to go)
> lapw0 -p (00:28:21) starting parallel lapw0 at Tue Mar 23 00:28:21
HKT 2004
--------
running lapw0 in single mode
5.070u 0.050s 0:05.14 99.6% 0+0k 0+0io 2709pf+0w
> lapw1 -p (00:28:26) starting parallel lapw1 at Tue Mar 23 00:28:27
HKT 2004
-> starting parallel LAPW1 jobs at Tue Mar 23 00:28:27 HKT 2004
running LAPW1 in parallel mode (using .machines)
2 number_of_parallel_jobs
localhost(51) 3.290u 0.360s 0:03.70 98.6% 0+0k 0+0io 405pf+0w
localhost(51) 3.440u 0.260s 0:03.67 100.8% 0+0k 0+0io 405pf+0w
Summary of lapw1para:
localhost k=102 user=6.73 wallclock=7.37
6.760u 0.800s 0:07.34 102.9% 0+0k 0+0io 17672pf+0w
> lapw2 -p (00:28:34) running LAPW2 in parallel mode
Segmentation fault
** LAPW2 crashed!
0.030u 0.060s 0:00.07 128.5% 0+0k 0+0io 5310pf+0w
> stop error
------------------------------------------------
David Zhang Jing Dong
Semiconductor Physics Lab,
G13, Chong Yuet Ming Physics Building
Deparment of Physics, The University of Hong Kong
Pokfulam Rd, Hong Kong SAR
Tel: 852 2859 2358 (O)
Fax: 852 2859 8972 (O)
-----Original Message-----
From: wien-admin at zeus.theochem.tuwien.ac.at
[mailto:wien-admin at zeus.theochem.tuwien.ac.at] On Behalf Of Griselda Garcia
Sent: Tuesday, March 23, 2004 3:39 AM
To: wien at zeus.theochem.tuwien.ac.at
Subject: [Wien] lapw2 message
Dear WIEN users,
I am getting the following error in a Fe afm calculation (the program
does not stop):
FORTRAN STOP LAPW0 END
FORTRAN STOP LAPW1 END
FORTRAN STOP LAPW2 END
Input/Output Error 148: Invalid character
In Procedure: main program
At Line: 365
Statement: Formatted READ
Unit: Internal File
Record Number: 1
Current I/O Buffer:
:GMA : POTENTIAL AND CHARGE CUT-OFF 14.00 Ry**.5
!
End of diagnostics
FORTRAN STOP CORE END
FORTRAN STOP CORE END
FORTRAN STOP MIXER END
in cycle 5 ETEST: 2.7098960000000000 CTEST: .8187655
Could you advice me how may I fix it?
Thanks in advance!
Griselda
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