[Wien] compilation error: missing libraries

Ricardo Faccio rfaccio at fq.edu.uy
Tue Mar 4 01:37:11 CET 2008


Please omit my last e-mail.
I get it! now it works
Thanks Laurence!
Ricardo
-------------------------------------------------------------------------
-----   Dr. Ricardo Faccio

  Mail: Cryssmat-Lab., Cátedra de Física, DETEMA
  Facultad de Química, Universidad de la República
       Av. Gral. Flores 2124, C.C. 1157
       C.P. 11800, Montevideo, Uruguay.
  E-mail: rfaccio at fq.edu.uy
  Phone: 598 2 9241860 Int. 109
             598 2 9290705
  Fax:    598 2 9241906
  Web:  http://cryssmat.fq.edu.uy/ricardo/ricardo.htm
----- Original Message ----- 
From: "Laurence Marks" <L-marks at northwestern.edu>
To: "A Mailing list for WIEN2k users" <wien at zeus.theochem.tuwien.ac.at>
Sent: Monday, March 03, 2008 8:31 PM
Subject: Re: [Wien] compilation error: missing libraries


> None of your mkl libraries are there so unless LD_LIBRARAY_PATH is setthe 
> shared libraries won't be found. (And beware that LD_LIBRARY_PATHis not 
> honored by some versions of the at command.) Rather than saying"do this" I 
> suggest that you do "man ldconfig", "man ld.so" and "manldd" which will 
> give you all the information you need to set up whatyou want.
> On Mon, Mar 3, 2008 at 6:26 PM, Ricardo Faccio <rfaccio at fq.edu.uy> wrote:> 
> Dear Laurence>     I checked the /etc/ld.so.conf and it has this content:> 
> /usr/X11R6/lib64/Xaw3d>>  /usr/X11R6/lib64>>  /usr/lib64/Xaw3d>> 
> /usr/X11R6/lib/Xaw3d>>  /usr/X11R6/lib>>  /usr/lib/Xaw3d>> 
> /usr/x86_64-suse-linux/lib>>  /usr/local/lib>>  /opt/kde3/lib>>  /lib64>> 
> /lib>>  /usr/lib64>>  /usr/lib>>  /usr/local/lib64>>  /opt/kde3/lib64>> 
> include /etc/ld.so.conf.d/*.conf>>  The last line includes "graphviz.conf" 
> which has this content:>>  /usr/lib64/graphviz>> 
> /usr/lib64/graphviz/sharp>>  /usr/lib64/graphviz/java>> 
> /usr/lib64/graphviz/perl>>  /usr/lib64/graphviz/php>> 
> /usr/lib64/graphviz/ocaml>>  /usr/lib64/graphviz/python>> 
> /usr/lib64/graphviz/lua>>  /usr/lib64/graphviz/tcl>> 
> /usr/lib64/graphviz/guile>>  /usr/lib64/graphviz/ruby>>  Does this look 
> normal to you?>  Regards> 
> Ricardo>  -------------------------------------------------------------------------> 
>   -----   Dr. Ricardo Faccio>>   Mail: Cryssmat-Lab., Cátedra de Física, 
> DETEMA>   Facultad de Química, Universidad de la República>        Av. 
> Gral. Flores 2124, C.C. 1157>        C.P. 11800, Montevideo, Uruguay.> 
> E-mail: rfaccio at fq.edu.uy>   Phone: 598 2 9241860 Int. 109> 
> 598 2 9290705>   Fax:    598 2 9241906>   Web: 
> http://cryssmat.fq.edu.uy/ricardo/ricardo.htm>  ----- Original 
> Message ----->  From: "Laurence Marks" <L-marks at northwestern.edu>>  To: "A 
> Mailing list for WIEN2k users" <wien at zeus.theochem.tuwien.ac.at>>  Sent: 
> Monday, March 03, 2008 8:01 PM>  Subject: Re: [Wien] compilation error: 
> missing libraries>>>  > Add -i-static -fminshared to avoid shared 
> libraries. You may also needto>  > look at what you have in 
> /etc/ld.so.conf>  >>  > On Mon, Mar 3, 2008 at 5:29 PM, Ricardo Faccio 
> <rfaccio at fq.edu.uy> wrote:>>  > Dear Gerhard>     All the settings that  I 
> choosed to compile have been>  > attached to this>  email. On the other 
> hand I am sending to the list the>  > tree of my MKL>  installation.> 
> As you can see all the paths seems to>  > be ok (I guess).>  Please let me 
> know what others thing should I check to>  > overcome this issue.>  Best 
> regards>>  > 
> icardo>>  ------------------------------------------------------------------------->> 
>  >   -----   Dr. Ricardo Faccio>>   Mail: Cryssmat-Lab., Cátedra de 
> Física,>  > DETEMA>   Facultad de Química, Universidad de la República> 
> Av.>  > Gral. Flores 2124, C.C. 1157>        C.P. 11800, Montevideo, 
> Uruguay.>>  > E-mail: rfaccio at fq.edu.uy>   Phone: 598 2 9241860 Int. 109>> 
>  > 598 2 9290705>   Fax:    598 2 9241906>   Web:>  > 
> http://cryssmat.fq.edu.uy/ricardo/ricardo.htm>  ----- Original>  > 
> Message ----->  From: "Gerhard Fecher" <fecher at uni-mainz.de>>  To: "A>  > 
> Mailing list for WIEN2k users" <wien at zeus.theochem.tuwien.ac.at>>  Sent:> 
>  > Monday, March 03, 2008 5:23 PM>  Subject: Re: [Wien] compilation error:> 
>  > missing libraries>>>  > Did you set LD_LIBRARY_PATH correctly ?>  >>  >> 
>  > Gerhard>  > ________________________________________>  > Von:>  > 
> wien-bounces at zeus.theochem.tuwien.ac.at>  >>  > 
> [wien-bounces at zeus.theochem.tuwien.ac.at] im Auftrag von Ricardo Faccio>> 
>  >  > [rfaccio at fq.edu.uy]>  > Gesendet: Montag, 3. März 2008 19:50>  > An:> 
>  > wien at zeus.theochem.tuwien.ac.at>  > Betreff: [Wien] compilation error:> 
>  > missing libraries>  >>  > Dear Wien2k users:>  >>  >    I'm trying to> 
>  > compile WIEN2k in a dell pc-desktop:>  > Core 2 Duo processor Intel(R)> 
>  > Core(TM)2 CPU  6420  @ 2.13GHz>  > 2 Gb RAM>  > OpenSuse 10.3, x86-64 
> bit>>  >  > I've installed the following programs an libraries:>  >>  > 
> #######################>  > /opt/intel/fce/10.1.012>  >>  > 
> /opt/intel/mkl/9.1.023/>  > #######################>  > I've choose the> 
>  > following OPTIONS in siteconfig>  >>  > 
> ######################################################################################>> 
>  >  > 
> current:FOPT:-FR -mp1 -w -prec_div -pc80 -pad -ip -DINTEL_VML -O3 -xT>>  > 
>  > current:FPOPT:-FR -mp1 -w -prec_div -pc80 -xT -pad -ip -DINTEL_VML^M> 
>  >>  > 
> current:LDFLAGS:$(FOPT) -L/opt/intel/fce/10.1.012/lib -lguide -lpthread>> 
>  >  > current:DPARALLEL:'-DParallel'^M>  >>  > 
> current:R_LIBS:-L/opt/intel/mkl/9.1.023/lib/em64t -lmkl_lapack -lmkl_em64t>> 
>  >  > current:RP_LIBS:-L /usr/local/SCALAPACK -L>  >>  > 
> /usr/local/BLACS/LIB -lpblas -lredist -ltools -lscalapack -lfblacs -lblacs>> 
>  >  >  -lmpi^M>  >>  > 
> ######################################################################################>> 
>  >  >>  > After a successfully compilation, the lapw1 crashes when it is> 
>  > executed in>  > normal conditions. The program stops with the following> 
>  > error:>  >>  >>  > 
> ######################################################################################>> 
>  >  > /home/ricardo/WIEN2k/lapw1: error while loading shared libraries:> 
>  >>  > libmkl_lapack.>  > so: cannot open shared object file: No such file 
> or>  > directory>  >>  > 
> ######################################################################################>> 
>  >  >>  > I tried so many options, but for some reason there is something> 
>  > missing in>  > the path and I can't fix it.>  > It is clear from the>  > 
> OPTIONS that the PATH is correct, and all the>  > libraries are located 
> in>  > such a folder.>  > Any hint?>  >>  > Best regards>  > Ricardo>  >>> 
>  > 
>  > ------------------------------------------------------------------------->> 
>  >  > -----   Dr. Ricardo Faccio>  >>  >  Mail: Cryssmat-Lab., Cátedra de> 
>  > Física, DETEMA>  >  Facultad de Química, Universidad de la República> 
>  >>  > Av. Gral. Flores 2124, C.C. 1157>  >       C.P. 11800, Montevideo,> 
>  > Uruguay.>  >  E-mail: rfaccio at fq.edu.uy<mailto:rfaccio at fq.edu.uy>>  >> 
>  > Phone: 598 2 9241860 Int. 109>  >             598 2 9290705>  >  Fax:> 
>  > 598 2 9241906>  >  Web:  http://cryssmat.fq.edu.uy/ricardo/ricardo.htm> 
>  >>  > _______________________________________________>  > Wien mailing 
> list>  >>  > Wien at zeus.theochem.tuwien.ac.at>  >>  > 
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> Wien at zeus.theochem.tuwien.ac.at>>  > 
> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien>>>  >>  >>  > --  
> Laurence MarksDepartment of Materials Science and EngineeringMSE Rm>  > 
> 2036 Cook Hall2220 N Campus DriveNorthwestern UniversityEvanston, IL>  > 
> 60208, USATel: (847) 491-3996 Fax: (847) 491-7820email: L-marks at>  > 
> northwestern dot eduWeb: www.numis.northwestern.eduCommission on Electron> 
>  > Diffraction of>  > 
> IUCRwww.numis.northwestern.edu/IUCR_CED_______________________________________________Wien> 
>  > mailing>  > 
> listWien at zeus.theochem.tuwien.ac.athttp://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien> 
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>
>
> -- Laurence MarksDepartment of Materials Science and EngineeringMSE Rm 
> 2036 Cook Hall2220 N Campus DriveNorthwestern UniversityEvanston, IL 
> 60208, USATel: (847) 491-3996 Fax: (847) 491-7820email: L-marks at 
> northwestern dot eduWeb: www.numis.northwestern.eduCommission on Electron 
> Diffraction of 
> IUCRwww.numis.northwestern.edu/IUCR_CED_______________________________________________Wien 
> mailing 
> listWien at zeus.theochem.tuwien.ac.athttp://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
>
>
> -- 
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