[Wien] lapw2 stops
Oleg Artamonov
arto at mail.nnz.ru
Thu Jan 29 11:39:51 CET 2009
Dear Robert Laskowski,
Thans for reply.
> hej,
>
> What does -traceback show, where does it crash? Did you try -check.
This is from case.dayfile
*****************
cycle 1 (Thu Jan 29 12:23:19 MSK 2009) (40/99 to go)
> lapw0 (12:23:19) 39.958u 1.652s 0:42.62 97.6% 0+0k 0+0io 0pf+0w
> lapw1 (12:24:02) 418.846u 6.664s 7:08.84 99.2% 0+0k 0+0io 0pf+0w
> lapw2 (12:31:11) Segmentation fault
0.232u 0.020s 0:00.50 50.0% 0+0k 0+0io 0pf+0w
error: command /home/senina/Wien_08_3_parallel/lapw2 lapw2.def failed
> stop error
************************
> What is in output2_proc_0 ?
>
This is the beginning of case.output2_proc_0
*******************
init_parallel_2 0 8 1 8 1
Running LAPW2 on 2 processors
MPI run on 8 processors in MPI_COMM_WORLD
8 processors in MPI_vec_COMM (atoms splitting)
1 processors in MPI_atoms_COMM (vector splitting)
myid= 0
myid_atm= 0
myid_vec= 0
Modus: TOT
no read error
RECPR LIST: NOFI
--------------------------------------------------
S T R U C T U R A L I N F O R M A T I O N
--------------------------------------------------
SUBSTANCE = octavetmp
LATTICE = P
LATTICE CONSTANTS ARE = 5.4518540 5.4518540 114.0000000
NUMBER OF ATOMS IN UNITCELL = 11
MODE OF CALCULATION IS = RELA
TYPE OF COORDINATES IN DSPLIT=
generate new recprlist
KXMAX,KYMAX,KZMAX 11 11 218
8772 PLANE WAVES GENERATED (INCLUDING FORBIDDEN H,K,L)
nwav1,kn 11111 8772
KVEC( 1) = 0 0 0 0.0000 1
*******************
Thank you,
Oleg.
> regards
>
> Robert
>
> On Wednesday 28 January 2009, Oleg Artamonov wrote:
>> Dear Wien users and leaders,
>>
>> The run_lapw (as well as run_lapw -p) works normal for the 7-layer
>> surface
>> of W and stops at the beginning of lapw2 for
>> the 22-layer surface of Au.
>>
>> We use (48 node *4 core) cluster with 2*Intel Xeon 5335, OS = Linux SLES
>> 10
>> SP1,
>> for parallelization - mvapich-1/0/0-1844, infinityband.
>> The siteconfig options are:
>> 1) For MPI ( mvapich ) parallelization:
>>
>> RP_LIB(SCALAPACK+PBLAS): -lmkl_intel_lp64 -lmkl_scalapack_lp64
>> -lmkl_blacs_lp64 -lmkl_sequential -lmkl_em64t
>>
>> FPOPT(par.comp.options): $(FOPT) -lmkl_intel_lp64 -lmkl_scalapack_lp64
>> -lmkl_blacs_lp64 -lmkl_sequential -lmkl_core -liomp5 -pthread -i-static
>>
>> MPIRUN commando : /share/mvapich-1.0.1-intel/bin/mpirun_rsh
>>
>> 2) For serial work:
>> Compiler
>> options: -FR -mp1 -prec_div -r8 -pc80 -fpconstant -traceback
>> -pad -align -O3 -ipo1 -DINTEL_VML -i-static -fminshared -xT -thread
>> -DINTEL_VML
>>
>> Linker Flags: -L/opt/intel/mkl/10.0.3.020/lib/em64t
>>
>> Preprocessor flags '-DParallel'
>>
>> R_LIB (LAPACK+BLAS): $(FPOPT) -lmkl_intel_lp64 -lmkl_scalapack_lp64
>> -lmkl_blacs_lp64 -lmkl_sequential -lmkl_core -liomp5 -pthread -i-static
>>
>> Thanks in advance for any suggestions,
>>
>> Oleg
>> Artamonov/
>>
>>
>>
>> _______________________________________________
>> Wien mailing list
>> Wien at zeus.theochem.tuwien.ac.at
>> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
>>
>
>
>
>
> --
> Dr Robert Laskowski
>
> Vienna University of Technology,
> Institute of Materials Chemistry,
> Getreidemarkt 9/165-TC, A-1060 Vienna
>
> tel. +43 1 58801 15686
> Fax +43 1 58801 15698
> _______________________________________________
> Wien mailing list
> Wien at zeus.theochem.tuwien.ac.at
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>
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