[Wien] compile SRC_qtl

["Paweł Leśniak, IFMPAN"]

W dniu 2009-06-18 16:46, John Rundgren pisze:
> I use compiler intel_for11.0.081 together with library intel_mkl10.1.1.019, and I get the following diagnosis when I compile SRC_qtl:
>
> l2main.f:(.text+0x3073): undefined reference to `zgemm_'
>
> My Makefile contains the following link and library statements:
>
> FC       = ifort
> CC       = gcc-4.3
> LINKER  = $(FC)
> FOPT    = -FR -mp1 -w -prec_div -pc80 -pad -align -DINTEL_VML -traceback
> FGEN    =
> LDFLAGS = $(FOPT) -L/opt/intel/mkl/10.1.1.019/lib/32 -pthread -i-static
> R_LIBS  = -lmkl_lapack -lmkl -liomp5 -lmkl_32 -lguide -lmkl_core
> C_LIBS  = $(R_LIBS)
>
> How, exactly, should these statements be written for a successful compilation of SRC_qtl ?
>
> The above statements work for all other SRC directories,
>    
You should use siteconfig_lapw when changing compiler switches.

On your configuration I'd use (I've x86_64 with ifort11,mkl10.1, so it's 
only a bit different):
FOPT = -FR -mp1 -w -prec_div -pc80 -pad -align -DINTEL_VML -O3 -xSSE4.1
FPOPT=$(FOPT)
LDFLAGS=$(FOPT) -L/opt/intel/mkl/10.1.1.019/lib/32 -pthread
DPARALLEL='-DParallel'
R_LIBS=-lmkl_lapack -lmkl -liomp5

Error you are getting can be caused by trying compilation without 
cleaning previous tries - it's better to use siteconfig_lapw which keeps 
care of such mistakes.

Pawel Lesniak