[Wien] SCF Parallel running error with core hole modification using TELNES
Peter Blaha
pblaha at theochem.tuwien.ac.at
Sat Oct 24 20:08:01 CEST 2009
ALWAYS: when a scf-calcuation has finish, use "save_lapw" to save these
results. (this removes the *broyd* files, which contain the density
history).
Then you can make a change (like a core-hole) and run another scf-cycle.
Guess what "mixer" should "think", when he had converged a density and
suddenly he gets a completely different density. How should he
extrapolate the next mixed density ?
Yi yoo soo schrieb:
> Dear, Prof. Blaha,
>
>
>
> Thanks for your helps and comments about parallel running in SMP system.
> I could solve the problems of running in parallel mode with modifying
> set up files of ssh and sshd and changing .machines file.
>
>
>
> In this time, I have faced a problem of occurring error on SCF running
> with modifying case.inc and case.in2 files to introduce core hole effect
> on ELNES spectrum. To calculate the ELNES spectrum, I did these procedure.
>
>
>
> I used small super cell (generated with F type super cell) MgO (2x2x2)
> with single 1s core hole on randomly selected Mg atom. (I tried to
> calculate Mg K-edge with single Mg 1s core hole)
>
> To modify case.inc and case.in2, I subtracted the one core electron with
> decreasing 1s occupation number of single Mg from 2 to 1;
>
> and I add extra valence electron by modifying case.in2 file with
> increasing number of valence electron.
>
> After modifying these files, I tried to run SCF in parallel mode (-cc
> 0.001 –ec 0.0001).
>
> However it crashed with some error message (see below attached file).
>
> After that, I just re-run the SCF after removing all SXF files and
> related data files (case.broyd#);
>
> then it works properly and presents the ELNES spectrum similar to
> previously reported calculation results.
>
>
>
> Firstly, I guessed that it could be the problem of large mixing factor,
> however it works even though I did not change any parameters related to
> construct initial electron density (generated lstart program). I am just
> wondering why this thing happens on SCF running; and is it the problem
> of setting mixing factor or modifying procedure of making core hole on
> single Mg atom?
>
>
>
>
>
> This attached file is STDOUT of case directory.
>
> ------------------------------------------------------------------------
>
> LAPW0 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW2 - FERMI; weighs written
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> SUMPARA END
>
> CORE END
>
> MIXER END
>
> ec cc and fc_conv 0 0 1
>
> in cycle 2 ETEST: 0 CTEST: 0
>
> LAPW0 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW1 END
>
> LAPW2 - FERMI; weighs written
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> LAPW2 END
>
> SUMPARA END
>
> CORE END
>
> forrtl: severe (67): input statement requires too much data, unit 32,
> file /data/wien2k_data/Calc_Test_MgO_7/Calc_Test_MgO_7.broyd2001
>
> Image PC Routine Line
> Source
>
> mixer 00000000004E87CD Unknown Unknown Unknown
>
> mixer 00000000004E72D5 Unknown Unknown Unknown
>
> mixer 000000000048F7F9 Unknown Unknown Unknown
>
> mixer 0000000000442E18 Unknown Unknown Unknown
>
> mixer 0000000000442628 Unknown Unknown Unknown
>
> mixer 0000000000469830 Unknown Unknown Unknown
>
> mixer 000000000046791A Unknown Unknown Unknown
>
> mixer 00000000004286E4 Unknown Unknown Unknown
>
> mixer 0000000000416555 Unknown Unknown Unknown
>
> mixer 00000000004037CC Unknown Unknown Unknown
>
> libc.so.6 0000003BC741D974 Unknown Unknown Unknown
>
> mixer 00000000004036D9 Unknown Unknown Unknown
>
>
>
>> stop error
>
> ------------------------------------------------------------------------
>
>
>
> Thank you very much for your help in advance.
>
>
>
> Sincerely, Yoo Soo
>
>
>
>
>
> *School of Earth and Environmental Science, Seoul National University,
> Korea*
>
> *Yi yoo soo*
>
> *e-mail: yys2064 at snu.ac.kr OR yiyoosoo at gmail.com*
>
> *office: +82-2-877-3072*
>
> *mobile: +82-10-2655-2064*
>
>
>
>
> ------------------------------------------------------------------------
>
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--
-----------------------------------------
Peter Blaha
Inst. Materials Chemistry, TU Vienna
Getreidemarkt 9, A-1060 Vienna, Austria
Tel: +43-1-5880115671
Fax: +43-1-5880115698
email: pblaha at theochem.tuwien.ac.at
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