[Wien] Problem with parallel LAPW1
Reza Mahani
kh.mahani at gmail.com
Thu Sep 27 09:56:36 CEST 2012
Thanks Gavin.
I tried commenting that line but it got stuck in lapw1 loop and it gave the
following error:
LAPW0 END
LAPW0 END
LAPW0 END
LAPW0 END
ssh_askpass: exec(/usr/libexec/openssh/gnome-ssh-askpass): No such file or
directory^M
Host key verification failed.^M
Regards
Reza
On Wed, Sep 26, 2012 at 6:21 PM, Gavin Abo <gsabo at crimson.ua.edu> wrote:
> You might try commenting
>
> !call W2kinit
>
> in SRC_lapw1/lapw1.F (line 34 Wien2k 12.1) and recompile as was mentioned:
>
> http://zeus.theochem.tuwien.ac.at/pipermail/wien/2012-August/017575.html
>
>
> On 9/26/2012 10:03 AM, Reza Mahani wrote:
>
>
> Hi Prof Blaha and wien2k users,
>
> I have recently installed wien2k 12.1 without any errors and I was running
> a test job with it inorder to check the parallel mode. It gave me the
> following errors:
> dayfile content:
>
> Calculating GaAs in /lunarc/nobackup/users/reza/WIEN2k/test/GaAs
> on an010 with PID 21141
> using WIEN2k_12.1 (Release 22/7/2012) in
> /lunarc/nobackup/users/reza/Wien2k_12.1
>
>
> start (Wed Sep 26 10:19:05 CEST 2012) with lapw0 (100/99 to go)
>
> cycle 1 (Wed Sep 26 10:19:05 CEST 2012) (100/99 to go)
>
> > lapw0 -p (10:19:05) starting parallel lapw0 at Wed Sep 26 10:19:06
> CEST 2012
> -------- .machine0 : 8 processors
> 16.100u 2.127s 0:06.00 303.6% 0+0k 132168+24680io 202pf+0w
> > lapw1 -c -up -p (10:19:12) starting parallel lapw1 at Wed Sep 26
> 10:19:12 CEST 2012
> -> starting parallel LAPW1 jobs at Wed Sep 26 10:19:12 CEST 2012
> running LAPW1 in parallel mode (using .machines)
> 1 number_of_parallel_jobs
> an010 an010 an010 an010 an010 an010 an010 an010(120) Child
> id 3 SIGSEGV, contact developers
> Child id 0 SIGSEGV, contact developers
> Child id 7 SIGSEGV, contact developers
> Child id 1 SIGSEGV, contact developers
> Child id 2 SIGSEGV, contact developers
> Child id 6 SIGSEGV, contact developers
> Child id 5 SIGSEGV, contact developers
> Child id 4 SIGSEGV, contact developers
> 0.341u 0.463s 0:01.42 56.3% 0+0k 1976+5760io 47pf+0w
> Summary of lapw1para:
> an010 k=0 user=0 wallclock=0
> 0.423u 0.884s 0:03.75 34.6% 0+0k 2496+6152io 53pf+0w
> > lapw1 -c -dn -p (10:19:16) starting parallel lapw1 at Wed Sep 26
> 10:19:16 CEST 2012
> -> starting parallel LAPW1 jobs at Wed Sep 26 10:19:16 CEST 2012
> running LAPW1 in parallel mode (using .machines.help)
> 1 number_of_parallel_jobs
> an010 an010 an010 an010 an010 an010 an010 an010(120) Child
> id 7 SIGSEGV, contact developers
> Child id 2 SIGSEGV, contact developers
> Child id 0 SIGSEGV, contact developers
> Child id 4 SIGSEGV, contact developers
> Child id 1 SIGSEGV, contact developers
> Child id 6 SIGSEGV, contact developers
> Child id 3 SIGSEGV, contact developers
> Child id 5 SIGSEGV, contact developers
> 0.123u 0.130s 0:01.18 21.1% 0+0k 0+1448io 15pf+0w
> Summary of lapw1para:
> an010 k=0 user=0 wallclock=0
> 0.209u 0.545s 0:03.70 20.0% 0+0k 0+1832io 15pf+0w
> > lapw2 -c -up -p (10:19:20) running LAPW2 in parallel mode
> ** LAPW2 crashed!
>
>
>
> job.err content:
>
> LAPW0 END
> LAPW0 END
> epl: Subscript out of range.
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> --------------------------------------------------------------------------
> MPI_ABORT was invoked on rank 7 in communicator MPI_COMM_WORLD
> with errorcode 80.
>
> Could you please tell me what causes this problem?
>
> Regards
> Reza
>
>
>
>
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