[Wien] How to do Site Configuration In Ubuntu 12.04
Gavin Abo
gsabo at crimson.ua.edu
Fri Apr 5 06:12:40 CEST 2013
Try changing the Linker and R_LIB lines to:
Linker Flags:$(FOPT) -L/opt/intel/composerxe/mkl/lib/ia32 -pthread
R_LIB (LAPACK+BLAS):-lmkl_lapack95 -lmkl_intel -lmkl_intel_thread
-lmkl_core -openmp -lpthread
On 4/4/2013 9:52 PM, vishal jain wrote:
> Dear Sir
>
> I found error on compiling (R=Compile and Recompile)
> .
>
> SRC_structeditor/SRC_ncmsymmetry/compile.msg:make: *** [module.o]
> Error 127
> SRC_structeditor/SRC_readwrite/compile.msg:make: *** [module.o] Error 127
> SRC_structeditor/SRC_struct2mol/compile.msg:make: *** [reallocate.o]
> Error 127
> SRC_structeditor/SRC_structgen/compile.msg:make: *** [module.o] Error 127
>
>
> In site configration i choose following comands
> S specify a system I choose I(ifort + MKL because i have installed
> l_mkl_11.0.2.146 and l_fcompxe_2013.3.163)
> )
> C i choose ifort + cc
> O shown below how to define path
>
>
> *********************************************************
> * W I E N *
> * site configuration *
> *********************************************************
>
> Last configuration: Fri Apr 5 09:14:26 IST 2013
> Wien Version: WIEN2k_12.1 (Release 22/7/2012)
> System: linuxifc
>
>
> S specify a system
> C specify compiler
> O specify compiler options, BLAS and LAPACK
> P configure Parallel execution
> D Dimension Parameters
> R Compile/Recompile
> U Update a package
> L Perl path (if not in /usr/bin/perl)
> Q Quit
>
> Selection: O
>
> ******************************
> * Specify compiler options *
> ******************************
>
> PLEASE NOTE: Best performance can be obtained with processor specific
> options.
> Very important for speed-up is a optimized BLAS (like mkl, essl, ..),
> or at least the GOTO- or ATLAS-BLAS instead of the simple "-lblas_lapw"
>
> For more info see http://www.wien2k.at/reg_user/faq
> searching ....
> I could not find the mkl-library because MKLROOT is not defined.
> Please check whether mkl is installed at all and where
> (mkl is included in new ifort versions, see www.intel.com
> <http://www.intel.com> )
> Without mkl you should install the GOTO-blas or you must use the
> blas_lapw
> library (performance loss)
> Hit Enter to continue
> Since intel changes the name of the mkl-libraries from version to version,
> you may find the linking options for the most recent ifort version at
> http://software.intel.com/en-us/articles/intel-mkl-link-line-advisor/
>
> Recommended options for system linuxifc are:
> Compiler options: -FR -mp1 -w -prec_div -pc80 -pad -ip
> -DINTEL_VML -traceback
> Linker Flags: $(FOPT)
> -L$(MKLROOT)/lib/$(MKL_TARGET_ARCH) -pthread
> Preprocessor flags: '-DParallel'
> R_LIB (LAPACK+BLAS): -lmkl_lapack95_lp64 -lmkl_intel_lp64
> -lmkl_intel_thread -lmkl_core -openmp -lpthread
>
> Current settings:
> O Compiler options: -FR -mp1 -w -prec_div -pc80 -pad -ip
> -DINTEL_VML -traceback
> L Linker Flags: $(FOPT) -pthread -static
> P Preprocessor flags '-DParallel'
> R R_LIB (LAPACK+BLAS): -lmkl_lapack95_ia32 -lmkl_intel_ia32
> -lmkl_intel_thread -lmkl_core -openmp -lpthread
>
> S Save and Quit
> Q Quit abandon changes
>
> To change an item select option.
>
> Selection:
>
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