[Wien] parallel segmentation fault

Luis Ogando lcodacal at gmail.com
Wed Feb 6 13:32:57 CET 2013


Hi Arturo,

    Try
http://zeus.theochem.tuwien.ac.at/pipermail/wien/2012-July/017207.html

    The first suggestion given by Prof. Marks solved a similar problem to
me.
    All the best,
                  Luis





2013/2/6 Arturo <artginer at bifi.es>

>  Hi,
>
> We are trying  to run wien2k v12, compiled with openmpi 1.5.4 and intel
> compilers 12.1 but it gives us a segmentations fault while executing the
> following:
>
> mpirun  -np 4  /cm/shared/apps/WIEN2k_12/lapw1_mpi  uplapw1_1.defcat
>
> The errors are these:
>
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> w2k_dispatch_signal(): received: Segmentation fault
> --------------------------------------------------------------------------
> MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD
> with errorcode 91.
>
> NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
> You may or may not see output from other processes, depending on
> exactly when Open MPI kills them.
> --------------------------------------------------------------------------
>  Child id           0 SIGSEGV, contact developers
>  Child id           1 SIGSEGV, contact developers
>  Child id           2 SIGSEGV, contact developers
>  Child id           3 SIGSEGV, contact developers
> --------------------------------------------------------------------------
> mpirun has exited due to process rank 2 with PID 25559 on
> node node042 exiting without calling "finalize". This may
> have caused other processes in the application to be
> terminated by signals sent by mpirun (as reported here).
> --------------------------------------------------------------------------
> [node042:25556] 3 more processes have sent help message help-mpi-api.txt /
> mpi-abort
> [node042:25556] Set MCA parameter "orte_base_help_aggregate" to 0 to see
> all help / error messages
>
> And the ulimit -s is unlimited.
>
> Could you help us executing wien2k in parallel mode? Sequential is working
> fine.
>
> Best Regards
> Arturo
>
>
> _______________________________________________
> Wien mailing list
> Wien at zeus.theochem.tuwien.ac.at
> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://zeus.theochem.tuwien.ac.at/pipermail/wien/attachments/20130206/dfa2b7e7/attachment.htm>


More information about the Wien mailing list