[Wien] mpiexec_mpt
Oleg Rubel
orubel at lakeheadu.ca
Thu Jul 11 16:25:18 CEST 2013
Dear Luis,
It looks like the problem is not in Wien2k. I would recommend to make sure
that you can get a list of host names correctly before proceeding with
wien. There are slight difference between various mpi implementation in a
way of passing the host name list.
Oleg
On 2013-07-11 9:52 AM, "Luis Ogando" <lcodacal at gmail.com> wrote:
> Dear Prof. Marks and Rubel,
>
> Many thanks for your kind responses.
> I am forwarding your messages to the computation center. As soon as I
> have any reply, I will contact you.
>
> I know that they have other wrappers (Intel MPI, for example), but
> they argue that mpiexec_mpt is the optimized option.
> I really doubt that this option will succeed, because I am getting the
> following error message in case.dayfile (bold)
>
>
> ================================================================================
> Calculating InPwurt15InPzb3 in
> /home/ice/proj/proj546/ogando/Wien/Calculos/InP/InPwurtInPzb/15camadasWZ+3ZB/InPwurt15InPzb3
> on r1i0n8 with PID 6433
> using WIEN2k_12.1 (Release 22/7/2012) in
> /home/ice/proj/proj546/ogando/RICARDO2/wien/src
>
>
> start (Wed Jul 10 13:29:42 BRT 2013) with lapw0 (150/99 to go)
>
> cycle 1 (Wed Jul 10 13:29:42 BRT 2013) (150/99 to go)
>
> > lapw0 -grr -p (13:29:42) starting parallel lapw0 at Wed Jul 10
> 13:29:42 BRT 2013
> -------- .machine0 : 12 processors
> *mpiexec_mpt error: -machinefile option not supported.*
> 0.016u 0.008s 0:00.40 2.5% 0+0k 0+176io 0pf+0w
> error: command /home/ice/proj/proj546/ogando/RICARDO2/wien/src/lapw0para
> -c lapw0.def failed
>
> > stop error
>
> ================================================================================
>
> Related to -sgi option, I am using -pbs option because PBS is the
> queueing system. As I said, I works well for parallel execution that uses
> just one node.
> Many thanks again,
> Luis
>
>
>
> 2013/7/11 Oleg Rubel <orubel at lakeheadu.ca>
>
>> Dear Luis,
>>
>> Can you run other MPI codes under SGI scheduler on your cluster? In any
>> case, I would suggest first to try the simplest check
>>
>> mpiexec -n $NSLOTS hostname
>>
>> this is what we use for Wien2k
>>
>> mpiexec -machinefile _HOSTS_ -n _NP_ _EXEC_
>>
>> the next line is also useful to ensure a proper CPU load
>>
>> setenv MV2_ENABLE_AFFINITY 0
>>
>>
>> I hope this will help
>> Oleg
>>
>>
>> On 13-07-11 8:32 AM, Luis Ogando wrote:
>>
>>> Dear WIEN2k community,
>>>
>>> I am trying to use WIEN2k 12.1 in a SGI cluster. When I perform
>>> parallel calculations using just "one" node, I can use mpirun and
>>> everything goes fine (many thanks to Prof. Marks and his SRC_mpiutil
>>> directory).
>>> On the other hand, when I want to use more than one node, I have to
>>> use mpiexec_mpt and the calculation fails. I also tried the mpirun for
>>> more than one node, but this is not the proper way in a SGI system and I
>>> did not succeed.
>>> Well, I would like to know if anyone has experience in using WIEN2k
>>> with mpiexec_mpt and could give me any hint.
>>> I can give more information. This is only an initial ask for help.
>>> All the best,
>>> Luis
>>>
>>>
>>>
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