[Wien] core leakage problem
Laurence Marks
L-marks at northwestern.edu
Mon Jul 13 12:10:28 CEST 2015
Yes. Please think.
---
Professor Laurence Marks
Department of Materials Science and Engineering
Northwestern University
http://www.numis.northwestern.edu
Corrosion in 4D http://MURI4D.numis.northwestern.edu
Co-Editor, Acta Cryst A
"Research is to see what everybody else has seen, and to think what nobody
else has thought"
Albert Szent-Gyorgi
On Jul 13, 2015 03:50, "Muhammad Sajjad" <sajjadpu at gmail.com> wrote:
> I used the command run_lapw -p -I -i 60 -fc 1. DO I need to change it ?
>
> On Mon, Jul 13, 2015 at 11:33 AM, Laurence Marks <L-marks at northwestern.edu
> > wrote:
>
>> No.
>> On Jul 13, 2015 4:37 PM, "Muhammad Sajjad" <sajjadpu at gmail.com> wrote:
>>
>>> Thank you professor L.Marks
>>> I followed your first two points and ran calculation. I did not fix the
>>> center of slab but relax the whole structure and the minimized forces are
>>> :FOR001: 1.ATOM 60.004776 -0.000002 -0.000003
>>> 60.004776 total forces
>>> :FOR002: 2.ATOM 33.431081 -0.000003 0.000003
>>> 33.431081 total forces
>>> :FOR003: 3.ATOM 33.431078 0.000003 -0.000003
>>> 33.431078 total forces
>>> :FOR004: 4.ATOM 60.004776 0.000003 0.000003
>>> 60.004776 total forces
>>> :FOR005: 5.ATOM 33.434049 0.000002 0.000001
>>> -33.434049 total forces
>>> :FOR006: 6.ATOM 60.056705 0.000001 -0.000001
>>> -60.056705 total forces
>>> :FOR007: 7.ATOM 60.056708 -0.000001 0.000000
>>> -60.056708 total forces
>>> :FOR008: 8.ATOM 33.434051 -0.000002 -0.000001
>>> -33.434051 total forces
>>> :FOR009: 9.ATOM 32.291125 0.000000 0.000000
>>> -32.291125 total forces
>>> :FOR010: 10.ATOM 32.291121 0.000000 0.000000
>>> -32.291121 total forces
>>> :FOR011: 11.ATOM 32.312836 0.000000 0.000000
>>> 32.312836 total forces
>>> :FOR012: 12.ATOM 32.312836 0.000000 0.000000
>>> 32.312836 total forces
>>>
>>> Is this calculation reliable?
>>>
>>> On Sun, Jul 12, 2015 at 4:33 PM, Laurence Marks <
>>> L-marks at northwestern.edu> wrote:
>>>
>>>> A few points:
>>>>
>>>> a) Your Si-H distance is too small, it should be about 1.45 Angstroms
>>>> and you have 1.0 Angstroms. With a better value most of your problems will
>>>> probably go away.
>>>>
>>>> b) To do a surface calculation you must use the DFT equilibrium
>>>> lattice parameters, not the bulk ones. If you do not the results will be
>>>> wrong.
>>>>
>>>> c) For a surface calculation you need the distance between the two
>>>> surfaces across the vacuum gap to be equal to or smaller than the distance
>>>> between the two surfaces across the crystal. I personally prefer to make
>>>> the bulk material twice as wide as the vacuum gap, so the atomic
>>>> relaxations at the center of the crystal are as small as possible. (Some
>>>> people will fix the center of the slab, but I think that is bad physics.)
>>>> Your bulk crystal is way too small.
>>>>
>>>> On Sun, Jul 12, 2015 at 7:27 AM, Muhammad Sajjad <sajjadpu at gmail.com>
>>>> wrote:
>>>>
>>>>> Dear All
>>>>> I am performing structural relaxation for Si (100) with H at its top
>>>>> and bottom (structure is attached, vacuum is 12 A). I have inspect the
>>>>> mailing list in detail (like
>>>>> http://www.wien2k.at/reg_user/textbooks/DFT_and_LAPW_2nd.pdf AND
>>>>> http://www.mail-archive.com/search?q=core+leakage&l=wien%40zeus.theochem.tuwien.ac.at)
>>>>> and have resolved the issue by selecting SE -12, but the calculation hang
>>>>> out after LAPW0. Inspection of lapw1_1.error message is "Error in LAPW1".
>>>>> Please suggest me the possible solution.
>>>>>
>>>>> One more thing I found in the list "
>>>>>
>>>>> If
>>>>> you have core leakage, inspect in case.outputst whether you can take
>>>>> some high-lying core states as valence states instead
>>>>>
>>>>> "
>>>>> Is it possible to make it manually with same SE ? or simple done by
>>>>> lowering down SE as I did?
>>>>>
>>>>> Many thanks
>>>>>
>>>>>
>>>>
>>>>
>>>> --
>>>> Professor Laurence Marks
>>>> Department of Materials Science and Engineering
>>>> Northwestern University
>>>> www.numis.northwestern.edu
>>>> Corrosion in 4D: MURI4D.numis.northwestern.edu
>>>> Co-Editor, Acta Cryst A
>>>> "Research is to see what everybody else has seen, and to think what
>>>> nobody else has thought"
>>>> Albert Szent-Gyorgi
>>>>
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>>>>
>>>>
>>>
>>>
>>> --
>>> Kind Regards
>>> Muhammad Sajjad
>>> Post Doctoral Fellow
>>> KAUST, KSA.
>>>
>>
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>>
>
>
> --
> Kind Regards
> Muhammad Sajjad
> Post Doctoral Fellow
> KAUST, KSA.
>
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