[Wien] TiC example fails with memory corruption error on Mixer

Laurence Marks L-marks at northwestern.edu
Mon Mar 23 14:36:59 CET 2015


I have seen this when one or more of the earlier steps failed. Please do ls
-l *.error and look at the length. If the programs ran they should be empty
files. You can also do tail *day* to see what failed.

Alternatively you may have incompatible versions of lapack being used (but
I dont think it is this).

N.B., don't expect much from a 32 bit virtual box with gfortran, it will be
slow.

___________________________
Professor Laurence Marks
Department of Materials Science and Engineering
Northwestern University
www.numis.northwestern.edu
MURI4D.numis.northwestern.edu
Co-Editor, Acta Cryst A
"Research is to see what everybody else has seen, and to think what nobody
else has thought"
Albert Szent-Gyorgi
On Mar 23, 2015 6:51 AM, "Williams, Alan" <aw14t at my.fsu.edu> wrote:

>   Hello,
> I am running the latest version of wien2k on a 32 bit linux  virtual
> machine.  I am using the gfortran compiler version 4.7.2.  When I run SCF
> on the TiC example following the instruction in the manual, I receive the
> following error in STDOUT:
>
>  STOP  LAPW0 END
> STOP  LAPW1 END
> STOP  LAPW2 END
> STOP  CORE  END
> *** glibc detected *** /home/alan/alanwien2k/wien2k/WIEN2k_14.2/mixer:
> malloc(): memory corruption: 0x083f19e0 ***
> ======= Backtrace: =========
> /lib/i386-linux-gnu/i686/cmov/libc.so.6(+0x70c91)[0x40258c91]
> /lib/i386-linux-gnu/i686/cmov/libc.so.6(+0x73a74)[0x4025ba74]
> /lib/i386-linux-gnu/i686/cmov/libc.so.6(__libc_malloc+0x5c)[0x4025d70c]
> /usr/lib/i386-linux-gnu/libgfortran.so.3(+0x1551b)[0x4004851b]
> ======= Memory map: ========
> 08048000-08145000 r-xp 00000000 08:01 436410
> /home/alan/alanwien2k/wien2k/WIEN2k_14.2/mixer
> 08145000-08146000 rw-p 000fd000 08:01 436410
> /home/alan/alanwien2k/wien2k/WIEN2k_14.2/mixer
> 08146000-081fa000 rw-p 00000000 00:00 0
> 083bb000-0841e000 rw-p 00000000 00:00 0          [heap]
> 40000000-4001c000 r-xp 00000000 08:01 142619     /lib/i386-linux-gnu/
> ld-2.13.so
> 4001c000-4001d000 r--p 0001b000 08:01 142619     /lib/i386-linux-gnu/
> ld-2.13.so
> 4001d000-4001e000 rw-p 0001c000 08:01 142619     /lib/i386-linux-gnu/
> ld-2.13.so
> 4001e000-4001f000 r-xp 00000000 00:00 0          [vdso]
> 4001f000-40021000 rw-p 00000000 00:00 0
> 40033000-4012c000 r-xp 00000000 08:01 658580
> /usr/lib/i386-linux-gnu/libgfortran.so.3.0.0
> 4012c000-4012d000 rw-p 000f9000 08:01 658580
> /usr/lib/i386-linux-gnu/libgfortran.so.3.0.0
> 4012d000-40151000 r-xp 00000000 08:01 131076
> /lib/i386-linux-gnu/i686/cmov/libm-2.13.so
> 40151000-40152000 r--p 00023000 08:01 131076
> /lib/i386-linux-gnu/i686/cmov/libm-2.13.so
> 40152000-40153000 rw-p 00024000 08:01 131076
> /lib/i386-linux-gnu/i686/cmov/libm-2.13.so
> 40153000-40154000 rw-p 00000000 00:00 0
> 40154000-40170000 r-xp 00000000 08:01 131096
> /lib/i386-linux-gnu/libgcc_s.so.1
> 40170000-40171000 rw-p 0001b000 08:01 131096
> /lib/i386-linux-gnu/libgcc_s.so.1
> 40171000-401e7000 r-xp 00000000 08:01 658952
> /usr/lib/i386-linux-gnu/libquadmath.so.0.0.0
> 401e7000-401e8000 rw-p 00075000 08:01 658952
> /usr/lib/i386-linux-gnu/libquadmath.so.0.0.0
> 401e8000-40347000 r-xp 00000000 08:01 131059
> /lib/i386-linux-gnu/i686/cmov/libc-2.13.so
> 40347000-40349000 r--p 0015e000 08:01 131059
> /lib/i386-linux-gnu/i686/cmov/libc-2.13.so
> 40349000-4034a000 rw-p 00160000 08:01 131059
> /lib/i386-linux-gnu/i686/cmov/libc-2.13.so
> 4034a000-40690000 rw-p 00000000 00:00 0
> 40700000-40721000 rw-p 00000000 00:00 0
> 40721000-40800000 ---p 00000000 00:00 0
> bf8d5000-bf8f7000 rw-p 00000000 00:00 0          [stack]
>
> Program received signal SIGABRT: Process abort signal.
>
>  This is a fresh install.  I was wondering if anyone knew what this
> problem was or how to fix it.
> Thank you for your help.
> Alan Williams
> National High Magnetic Field Laboratory
> Florida State University
> Tallahassee, FL
>
>
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://zeus.theochem.tuwien.ac.at/pipermail/wien/attachments/20150323/69b4244c/attachment-0001.html>


More information about the Wien mailing list