[Wien] Slurm

[Laurence Marks]

And, at least in an interactive job, none of these work...

Sigh. The man page of srun is also inconsistent with the actual srun
used....

On Wed, Nov 11, 2015 at 7:08 AM, Laurence Marks <laurence.marks at gmail.com>
wrote:

> Thanks. Does it produce a one line/entry list?
>
> I found a variant that might also work (need to test)
>
> # Generate Machinefile for mpich such that hosts are in the same order as
> if run via srun
>
> srun -l /bin/hostname | sort -n | awk '{print $2}' > MACHINEFILE
>
> # Run using generated Machine file:
>
> mpirun -np $SLURM_NTASKS -machinefile MACHINEFILE mpi-app
>
> If this works, then
>
> srun -l /bin/hostname | sort -n | awk '{print $2}' > MACHINEFILE
> set PBS_NODEFILE=MACHINEFILE
> x Machines2W
>
> "should" be general.
>
> N.B., standard caveats, i.e. where is hostname, does it always have the
> same format, is sort needed, etc...
>
> ---
> Professor Laurence Marks
> Department of Materials Science and Engineering
> Northwestern University
> http://www.numis.northwestern.edu
> Corrosion in 4D http://MURI4D.numis.northwestern.edu
> Co-Editor, Acta Cryst A
> "Research is to see what everybody else has seen, and to think what nobody
> else has thought"
> Albert Szent-Gyorgi
> On Nov 11, 2015 00:36, "Peter Blaha" <pblaha at theochem.tuwien.ac.at> wrote:
>
>> The commands
>> srun hostname -s  >slurm.hosts
>> set proclist=`cat slurm.hosts|sort`
>>
>> within a slurm-job give you a list of your hosts.
>>
>> Am 11.11.2015 um 01:04 schrieb Laurence Marks:
>> > Does anyone know the "machines" format for slurm? I want to expand
>> > Machines2W so it can use it (& I can use a slurm based system).
>> >
>> >
>> >
>> > _______________________________________________
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>> >
>>
>> --
>> --------------------------------------------------------------------------
>> Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060 Vienna
>> Phone: +43-1-58801-165300             FAX: +43-1-58801-165982
>> Email: blaha at theochem.tuwien.ac.at    WIEN2k: http://www.wien2k.at
>> WWW:   http://www.imc.tuwien.ac.at/staff/tc_group_e.php
>> --------------------------------------------------------------------------
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>>
>


-- 
Professor Laurence Marks
Department of Materials Science and Engineering
Northwestern University
www.numis.northwestern.edu
Corrosion in 4D: www.numis.northwestern.edu/MURI
Co-Editor, Acta Cryst A
"Research is to see what everybody else has seen, and to think what nobody
else has thought"
Albert Szent-Gyorgi
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