[Wien] running wien2k on cluster
ahmed amine
ahmedamine_dz at hotmail.fr
Wed Apr 26 23:15:30 CEST 2017
Hello,
i have problem running on a cluster, I can't run paralel calculation
dayfile
start (mer. avril 26 21:48:01 CET 2017) with lapw0 (40/99 to go)
cycle 1 (mer. avril 26 21:48:01 CET 2017) (40/99 to go)
> lapw0 -p (21:48:01) starting parallel lapw0 at mer. avril 26 21:48:16 CET 2017
-------- .machine0 : 24 processors
0.030u 0.080s 0:12.95 0.8% 0+0k 0+304io 0pf+0w
> lapw1 -p -c (21:48:24) starting parallel lapw1 at mer. avril 26 21:48:39 CET 2017
-> starting parallel LAPW1 jobs at mer. avril 26 21:48:44 CET 2017
running LAPW1 in parallel mode (using .machines)
running lapw1c in single mode
i have this error in job.out
/tmp/slurmd/job03057/slurm_script: line 12: hostlist : commande introuvable
.machine
lapw0: :24
granularity:1
extrafine:1
i'm using this slurm script
#!/bin/bash
#SBATCH --mem=1024
#SBATCH --ntasks=12
#SBATCH --nodes=2
#SBATCH --output=job.out
# set .machines for parallel job
# lapw0 running on one node
echo -n "lapw0: " > .machines
echo -n $(hostlist -e $SLURM_JOB_NODELIST | tail -1) >> .machines
echo "$i:24" >> .machines
echo granularity:1 >> .machines
echo extrafine:1 >> .machines
run_lapw -p -NI
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