[Wien] How to fit birch Murnaghan EOS for the orthorhombic case
delamora
delamora at unam.mx
Sun May 28 16:47:38 CEST 2017
the equation you should fit is
F(x,y,z)=a+bx+cy+dz+exy+fxz+gyz+hx^2+iy^2+jz^2
This is "parabolic" in the 3 dimensions, you have 10 parameters to fit (a,b,c...) and 10 data points
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De: Wien <wien-bounces at zeus.theochem.tuwien.ac.at> en nombre de BUSHRA SABIR <b_sabir437 at yahoo.com>
Enviado: sábado, 27 de mayo de 2017 02:32 p. m.
Para: wien at zeus.theochem.tuwien.ac.at
Asunto: [Wien] How to fit birch Murnaghan EOS for the orthorhombic case
Dear Delamora
Thank you for consideration of query.
Sorry for late response because my previous calculation was deleted as my system was crashed.
Now I re-optimised my orthorhombic structure with option 6 in "x optimize".
I generated 10 structure files and calculation finished without any issue.
Now I followed your suggestion and tried to fir "D 2nd degree equation" but could not do it.
I tried with different commands but each time I face a new problem.
I invoke the parabolfit_lapw command at terminal and then issue orders of dimension. See below what I am getting for different dimension orders:
A.# parabolfit_lapw
enter dimensionality (2-4) of fit:
2
ls: No match.
ls: No match.
pmo_opt6.ene and pmo_opt6.latparam generated
Enter dimension of fit (number of variable lattice parameters, 1-6):
2 fitcase 6 parameter
lowest data point: 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000
INCONSISTENT DIMENSIONS
Parabolic equation of state: info 66
E = x1 + x2(a-x3)^2
+ x4(b-x5)^2 + x6(a-x3)(b-x5)
Fitparameter are
1.000000 0.100000 0.000000 0.100000
0.000000 0.100000
0
lattic parameters energy de(EOS)
Sigma: 0.000000
Optionally create data points from fit function
Enter number of datapoints for your 2 dimensional Energy surface
NI=0 terminates; NI=1 will use 1 specific value in I-th component and allows to
generate 2D-cuts
0.0u 0.0s 0:00.03 66.6% 0+0k 120+8io 1pf+0w
kcbhamu at Lenovo-B570:~/wien_ work/sabir/MP/pmo
B. # parabolfit_lapw
enter dimensionality (2-4) of fit:
3
scf: Undefined variable.
C. # parabolfit_lapw
enter dimensionality (2-4) of fit:
4
ls: No match.
ls: No match.
pmo_opt6.ene and pmo_opt6.latparam generated
Enter dimension of fit (number of variable lattice parameters, 1-6):
4 fitcase 15 parameter
lowest data point: 0.000000000000000E+000 0.000000000000000E+000
0.000000000000000E+000 0.000000000000000E+000 0.000000000000000E+000
INCONSISTENT DIMENSIONS
Parabolic equation of state: info 66
E = x1 + x2(a-x3)^2
+ x4(b-x5)^2 + x6(a-x3)(b-x5)
+ x7(c-x8)^2 + x9(a-x3)(c-x8) + x10(b-x5)(c-x8)
+ x11(d-x12)^2 + x13(a-x3)(d-x12) + x14(b-x5)(d-x12) + x15(c-x8)(d-x12)
Fitparameter are
1.000000 0.100000 0.000000 0.100000
0.000000 0.100000 0.100000 0.000000
0.100000 0.100000 0.100000 0.000000
0.100000 0.100000 0.100000
0
lattic parameters energy de(EOS)
Sigma: 0.000000
Optionally create data points from fit function
Enter number of datapoints for your 4 dimensional Energy surface
NI=0 terminates; NI=1 will use 1 specific value in I-th component and allows to
generate 2D-cuts
0.0u 0.0s 0:00.01 0.0% 0+0k 0+8io 0pf+0w
I also saw one suggestion from Dr. Fecher but I could not implant it:
http://www.mail-archive.com/ wien at zeus.theochem.tuwien.ac. at/msg03070.html<http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg03070.html>
<http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg03070.html>
I do not know what more information I should supply here.
Could you please suggest me in some more detail?
I have the following scf file:
case_opt6_1.scf case_opt6_5.scf case_opt6_abc___2.0_default. scf case_opt6_abc___6.0_default. scf
case_opt6_2.scf case_opt6_6.scf case_opt6_abc___3.0_default. scf case_opt6_abc___7.0_default. scf
case_opt6_3.scf case_opt6_abc__10.0_default. scf case_opt6_abc___4.0_default. scf case_opt6_abc___8.0_default. scf
case_opt6_4.scf case_opt6_abc___1.0_default. scf case_opt6_abc___5.0_default. scf case_opt6_abc___9.0_default. scf
Regards
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