[Wien] error in running .machines file

venkatesh chandragiri venkyphysicsiitm at gmail.com
Thu Jun 14 22:37:17 CEST 2018


Dear wien2k users,

I forgot to mention in my earlier mail that I have already have .ssh folder
in the server where wien2k installed and already copied the key in the
id_rsa.pub file to authorized_keys file . But I don't know why the second
error (when I used .machines file without lapw0 line) came


================ error without including lapw0 line ==========

 LAPW0 END
 read identiti failed: Success
 ssh_exchange_identification: Connection closed by remote host^M
 read identiti failed: Success
 ssh_exchange_identification: Connection closed by remote host^M
 read identiti failed: Success
=================================================

[renwei at ln3 ~/.ssh]$ ls -la
total 32
drwx------  2 renwei renwei  4096 Jun 15 04:10 .
drwx------ 44 renwei renwei  4096 Jun 15 04:10 ..
-rw-------  1 renwei renwei  1200 May 19 13:46 authorized_keys
-rw-------  1 renwei renwei  1675 May 17 13:44 id_rsa
-rw-r--r--  1 renwei renwei   392 May 17 13:44 id_rsa.pub
-rw-r--r--  1 renwei renwei 11641 Jun 14 10:45 known_hosts

do I need to change the permission between the authorized_keys & id_rsa.pub
...?

thanks

venkatesh

On Thu, Jun 14, 2018 at 11:49 PM, venkatesh chandragiri <
venkyphysicsiitm at gmail.com> wrote:

> Dear wien2k users,
>
> Although, I have successfully completed "init_lapw". I got errors when
> runned the .machines one with including the lapw0 line and the other
> without including it.
>
> I have already kept the all the linking paths in .bashrc file which are
> given below,
>
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/THFS/opt/intel/
> composer_xe_2013_sp1.3.174/mkl/lib/intel64
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel/impi/5.0.2.
> 044/intel64/lib
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/THFS/home/renwei/venky/
> soft/libxc/lib
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/THFS/home/renwei/venky/
> soft/fftw/lib
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib64
> export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/intel/lib/intel64
> source /THFS/opt/intel/composer_xe_2013_sp1.3.174/bin/compilervars.sh
> intel64
> source /THFS/opt/intel/composer_xe_2013_sp1.3.174/bin/ifortvars.sh intel64
> source /THFS/opt/intel/composer_xe_2013_sp1.3.174/mkl/bin/mklvars.sh
> intel64
> source /THFS/opt/intel/impi/5.0.2.044/intel64/bin/mpivars.sh intel64
>
> ================ error with including lapw0 line ==========
>
>
>   **  LAPW1 crashed!
>  1.909u 4.983s 0:12.42 55.3% 0+0k 0+4416io 0pf+0w
>  error: command   /THFS/home/renwei/venky/soft/wien2k/lapw1cpara -up -c
> uplapw1.def   failed
>
> =====error==========
>  begin time is Thu Jun 14 09:25:19 CST 2018
>
>  /THFS/home/renwei/venky/soft/wien2k/lapw0_mpi: error while loading
> shared libraries: libmpifort.so.12: cannot open shared object file: No such
> file or directory
>  /THFS/home/renwei/venky/soft/wien2k/lapw0_mpi: error while loading
> shared libraries: libmpifort.so.12: cannot open shared object file: No such
> file or directory
>
> /THFS/opt/intel/composer_xe_2013_sp1.3.174/mkl/bin/mklvars.sh: line 118:
> manpath: command not found
>
> ====================
>
>
> ================ error without including lapw0 line ==========
>
>  LAPW0 END
>  read identiti failed: Success
>  ssh_exchange_identification: Connection closed by remote host^M
>  read identiti failed: Success
>  ssh_exchange_identification: Connection closed by remote host^M
>  read identiti failed: Success
> =================================================
>
> Can someone help me to run the calculations and find out the reasons for
> the above errors.
>
> thank you
>
> venkatesh
>
>
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