[Wien] Segmentation fault (core dumped) error in w2w with spin-orbit
Md. Fhokrul Islam
fislam at hotmail.com
Thu Jul 25 18:49:22 CEST 2019
Dear Kyohoon,
Thank you for your reply. Our procedure are almost the same. First I use prepare_w2wdir [dirrecotry name] and then I initialize the calculation with init_w2w -up, so it does all the steps you mentioned both for DFT part and Wannier90.
After initialization I run:
x lapw1 -c -up (my system doesn't have inversion symmetry)
x lapw1 -c -dn
x lapwso -up
x w2w -up -so ---> job crashes here with core dumped error
x w2w -dn -so
x wannier90 -so
I have used this procedure for several other calculation with different systems
and it worked. But for some reason, for this system it is works only up to lapwso.
I will check if they problem goes away with smaller k-mesh.
Regards,
Fhokrul
________________________________
From: Wien <wien-bounces at zeus.theochem.tuwien.ac.at> on behalf of Kyohoon Ahn <butz1004 at korea.ac.kr>
Sent: Thursday, July 25, 2019 3:53 PM
To: A Mailing list for WIEN2k users <wien at zeus.theochem.tuwien.ac.at>
Subject: Re: [Wien] Segmentation fault (core dumped) error in w2w with spin-orbit
Dear Fhokrul,
I also usually do some calculations with [run_lapw -so].
(i.e., not runsp_lapw)
So I may be I can share my experiences.
In my case, the procedure is following:
########################################
### PART 1. WIEN2K ###
########################################
\cp case.vns case.vnsup
\cp case.vns case.vnsdn
\cp case.vsp case.vspup
\cp case.vsp case.vspdn
x kgen -fbz (no shift)
x lapw1 -up (and with the additional options from the dayfile)
x lapw1 -dn
x lapwso -up
########################################
### PART 2. WIEN2WANNIER & WANNIER90 ###
########################################
write_inwf -up
write_inwf -dn
write_win -up
write case.fermiup and case.fermidn
x wannier90 -pp
x w2w -so -up
x w2w -so -dn
wannier90 -so
The above procedure works fine for me.
Is there any difference from yours?
Have a nice day.!
Best regards,
- Kyohoon
2019년 7월 23일 (화) 오후 3:04, Md. Fhokrul Islam <fislam at hotmail.com<mailto:fislam at hotmail.com>>님이 작성:
Hi Wien2k users and developers,
I encountered couple of problems running w2w with SO for a tetragonal Cd3As2 (with some impurity). I am using Wien2k18.2.
1. This is a non-magnetic system so I did run spin unpolarized calculations (x lapw1, x lapwso) following a note by Elias Assmann but it crashes when starts
x w2w -so -up
x w2w -so -dn
It asks for spin-polarized files vspup and vspdn files etc. I have done several non-magnetic calculations with exactly the same approach but I didn't have any problem before. But for some reason, in this case the upw2w.def and dnw2w.def files are just like the way it creates def files for spin-polarized calculations. I tried copying .vsp file to vspup and vspdn, and also other files to corresponding spin-polarized extension but it didn't work.
2. Because of this problem in (1) I rerun the DFT calculations with spin-polarized setting but this time it crashed with the error:
Segmentation fault (core dumped)
Segmentation fault (core dumped)
There are some segmentation fault in 'w2w -so' reported in mailing list in 2016 but I understood the issue is resolved for later version of w2w. So I am not sure why I am getting the error. There is no other error message.
Note that the bandstructure calculation works fine for this system, so the problem is something to do with w2w. I am wondering if anyone has encountered similar problem or has any suggestion on how to fix it.
Thanks,
Fhokrul
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