[Wien] slurm mpi
webfinder at ukr.net
webfinder at ukr.net
Mon May 6 14:23:34 CEST 2019
Dear wien2k users,
wien2k_18.2
I'm trying to run a test task on a cluster with slurm batch system using mpi parallelization.
In "parallel_options" USE_REMOTE=0, MPI_REMOTE=0.
(during the siteconfig_lapw the slurm option was chosen)
the k-point parallelization works well. But if I change the "slurm.job" script to produce .machines file for mpi run
(e.g. from
1: hostname
1: hostname
....
to
1: hostname hostname ....)
there is always a error message:
permission_denied, please try again.
permission_denied, please try again
permission_denied, please try again (....)
How can I solve this?
How could it be that k-point parallelization works but mpi not?
P.S. I have also tried after getting "nodelist" from batch system to include ssh-copy-id command to slurm.job script to copy the keys but the result is the same.
Thank you for the answers!
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://zeus.theochem.tuwien.ac.at/pipermail/wien/attachments/20190506/a894efd5/attachment.html>
More information about the Wien
mailing list