[Wien] Swapping atomic positions in case.struct
Peter Blaha
peter.blaha at tuwien.ac.at
Fri Dec 27 09:46:38 CET 2024
In general I do NOT think that you can do it, although there might be
cases where it works. In specific cases even the local rotation matrix
or the symmetry operations after init_so may change, so everything
depends on the specific case.
Test: Copy the struct file in a new directory, swap the positions and do
the init_lapw and init_so again.
Make a "diff" of the struct and in2c files in the 2 directories.
If there are no differences (besides blanks and the swapped atoms), you
are probably save. Still, I would run a single scf iteration and check
if :DIS remains small.
Am 26.12.2024 um 10:14 schrieb pluto via Wien:
> Dear Prof. Blaha, dear All,
>
> I converged large slab that contains some Mn atoms with spin, SOC, and
> GGA+U. I saved the calculation with save_lapw. Here is one of the Mn
> atoms in the case.struct:
>
> ATOM -5: X=0.00000000 Y=0.50000000 Z=0.22529133
> MULT= 4 ISPLIT= 8
> -5: X=0.00000000 Y=0.50000000 Z=0.77470867
> -5: X=0.50000000 Y=0.50000000 Z=0.22529133
> -5: X=0.50000000 Y=0.50000000 Z=0.77470867
> Mn2 NPT= 781 R0=.000050000 RMT= 2.50000 Z: 25.00000
>
> I would like to reconverge this calculation, but swap the non-equivalent
> positions into:
>
> ATOM -5: X=0.50000000 Y=0.50000000 Z=0.22529133
> MULT= 4 ISPLIT= 8
> -5: X=0.50000000 Y=0.50000000 Z=0.77470867
> -5: X=0.00000000 Y=0.50000000 Z=0.22529133
> -5: X=0.00000000 Y=0.50000000 Z=0.77470867
> Mn2 NPT= 781 R0=.000050000 RMT= 2.50000 Z: 25.00000
>
>
> Can I do the following:
>
> 1). restore_lapw (in a new folder)
>
> 2). edit case.struct as explained above, that is swap non-equivalent Mn
> atoms
>
> 3). Run the SCF calculation with -NI
>
>
> Or perhaps I need to do init_lapw and init_so_lapw again?
>
> Best,
> Lukasz
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