<div dir="auto">What does<div dir="auto"><br><span style="font-family:sans-serif;font-size:12.8px">ssh vlsi1 which lapw1c</span></div><div dir="auto"><span style="font-size:12.8px;font-family:sans-serif">give, what does "cat *.error" give in the case directory?</span><br></div><div dir="auto"><div data-smartmail="gmail_signature" dir="auto">_____<br>Professor Laurence Marks<br>"Research is to see what everybody else has seen, and to think what nobody else has thought", Albert Szent-Gyorgi<br><a href="http://www.numis.northwestern.edu">www.numis.northwestern.edu</a></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sun, Sep 29, 2019, 01:17 Indranil mal <<a href="mailto:indranil.mal@gmail.com">indranil.mal@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div>Now echo $WIENROOT is giving the $WIENROOT location. <br></div><div><br></div><div>
<span></span>
<p style="margin-bottom:0cm;line-height:100%"> echo
$WIENROOT/lapw*</p>
<p style="margin-bottom:0cm;line-height:100%">/home/username/WIEN2K/lapw0
/home/username/WIEN2K/lapw0_mpi /home/username/WIEN2K/lapw0para
/home/username/WIEN2K/lapw0para_lapw /home/username/WIEN2K/lapw1
/home/username/WIEN2K/lapw1c /home/username/WIEN2K/lapw1c_mpi
/home/username/WIEN2K/lapw1cpara /home/username/WIEN2K/lapw1_mpi
/home/username/WIEN2K/lapw1para /home/username/WIEN2K/lapw1para_lapw
/home/username/WIEN2K/lapw2 /home/username/WIEN2K/lapw2c
/home/username/WIEN2K/lapw2c_mpi /home/username/WIEN2K/lapw2cpara
/home/username/WIEN2K/lapw2_mpi /home/username/WIEN2K/lapw2para
/home/username/WIEN2K/lapw2para_lapw /home/username/WIEN2K/lapw3
/home/username/WIEN2K/lapw3c /home/username/WIEN2K/lapw5
/home/username/WIEN2K/lapw5c /home/username/WIEN2K/lapw7
/home/username/WIEN2K/lapw7c /home/username/WIEN2K/lapwdm
/home/username/WIEN2K/lapwdmc /home/username/WIEN2K/lapwdmcpara
/home/username/WIEN2K/lapwdmpara
/home/username/WIEN2K/lapwdmpara_lapw /home/username/WIEN2K/lapwso
/home/username/WIEN2K/lapwsocpara /home/username/WIEN2K/lapwso_mpi
/home/username/WIEN2K/lapwsopara
/home/username/WIEN2K/lapwsopara_lapw</p>
<p style="margin-bottom:0cm;line-height:100%">ssh vlsi1 'echo
$WIENROOT/lapw*'</p>
<p style="margin-bottom:0cm;line-height:100%">/home/username/WIEN2K/lapw0
/home/username/WIEN2K/lapw0_mpi /home/username/WIEN2K/lapw0para
/home/username/WIEN2K/lapw0para_lapw /home/username/WIEN2K/lapw1
/home/username/WIEN2K/lapw1c /home/username/WIEN2K/lapw1c_mpi
/home/username/WIEN2K/lapw1cpara /home/username/WIEN2K/lapw1_mpi
/home/username/WIEN2K/lapw1para /home/username/WIEN2K/lapw1para_lapw
/home/username/WIEN2K/lapw2 /home/username/WIEN2K/lapw2c
/home/username/WIEN2K/lapw2c_mpi /home/username/WIEN2K/lapw2cpara
/home/username/WIEN2K/lapw2_mpi /home/username/WIEN2K/lapw2para
/home/username/WIEN2K/lapw2para_lapw /home/username/WIEN2K/lapw3
/home/username/WIEN2K/lapw3c /home/username/WIEN2K/lapw5
/home/username/WIEN2K/lapw5c /home/username/WIEN2K/lapw7
/home/username/WIEN2K/lapw7c /home/username/WIEN2K/lapwdm
/home/username/WIEN2K/lapwdmc /home/username/WIEN2K/lapwdmcpara
/home/username/WIEN2K/lapwdmpara
/home/username/WIEN2K/lapwdmpara_lapw /home/username/WIEN2K/lapwso
/home/username/WIEN2K/lapwsocpara /home/username/WIEN2K/lapwso_mpi
/home/username/WIEN2K/lapwsopara
/home/username/WIEN2K/lapwsopara_lapw</p>
<p style="margin-bottom:0cm;line-height:100%"><br>
</p>
<p style="margin-bottom:0cm;line-height:100%">However getting the same error <br></p><table bgcolor="#c3ffd2"><tbody><tr><td bgcolor="#E0E0E0"><form action="http:///util/stdout.pl" method="POST" target="_blank">
</form>
<br></td><td bgcolor="#E0E0E0">
<br></td></tr></tbody></table><pre>> stop error
grep: *scf1*: No such file or directory
cp: cannot stat '.in.tmp': No such file or directory
FERMI - Error
grep: *scf1*: No such file or directory
Parallel.scf1_1: No such file or directory.
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
bash: fixerror_lapw: command not found
bash: lapw1c: command not found
LAPW0 END
hup: Command not found.</pre><p style="margin-bottom:0cm;line-height:100%">
</p>
<p style="margin-bottom:0cm;line-height:100%"><br>
</p>
<p style="margin-bottom:0cm;line-height:100%">and lapw2 error file <br></p><p style="margin-bottom:0cm;line-height:100%"> 'LAPW2' - can't open unit: 30 <br> 'LAPW2' - filename: Parallel.energy_1 <br>** testerror: Error in Parallel LAPW2<br>
</p>
</div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sat, Sep 28, 2019 at 11:58 PM Gavin Abo <<a href="mailto:gsabo@crimson.ua.edu" target="_blank" rel="noreferrer">gsabo@crimson.ua.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF">
<p><font face="Times New Roman">The "<font color="#ff0000">sudo
service sshd restart</font>" step, which I forgot to copy and
paste, that is missing is corrected below.</font><br>
</p>
<div>On 9/28/2019 12:18 PM, Gavin Abo wrote:<br>
</div>
<blockquote type="cite">
<p>After you set both "SendEnv *" and "AcceptEnv *", did you
restart the sshd service [1]? The following illustrates steps
that might help you verify that WIENROOT appears on a remote
vlsi node:<br>
</p>
<p>username@computername:~$ echo $WIENROOT<br>
<br>
username@computername:~$ export WIENROOT=/servernode1<br>
username@computername:~$ echo $WIENROOT<br>
/servernode1<br>
username@computername:~$ ssh vlsi<br>
Welcome to Ubuntu 18.04.3 LTS (GNU/Linux 4.15.0-64-generic
x86_64)<br>
... <br>
Last login: Sat Sep 28 12:04:07 2019 from xxx.x.x.x<br>
username@computername:~$ echo $WIENROOT<br>
<br>
username@computername:~$ exit<br>
logout<br>
Connection to vlsi closed.<br>
username@computername:~$ sudo gedit /etc/ssh/ssh_config <br>
[sudo] password for username: <br>
<br>
username@computername:~$ sudo gedit /etc/ssh/sshd_config <br>
<br>
username@computername:~$ grep SendEnv /etc/ssh/ssh_config<br>
SendEnv LANG LC_* WIENROOT<br>
username@computername:~$ grep AcceptEnv /etc/ssh/sshd_config<br>
AcceptEnv LANG LC_* WIENROOT<br>
</p>
</blockquote>
username@computername:~$ <font color="#ff0000">sudo service sshd
restart</font><br>
<blockquote type="cite">
<p> username@computername:~$ ssh vlsi<br>
...<br>
username@computername:~$ echo $WIENROOT<br>
/servernode1<br>
username@computername:~$ exit<br>
</p>
<p>[1]
<a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__askubuntu.com_questions_462968_take-2Dchanges-2Din-2Dfile-2Dsshd-2Dconfig-2Dfile-2Dwithout-2Dserver-2Dreboot&d=DwMFaQ&c=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws&r=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0&m=BP0kuacuLbCvaswrI8sq446rvs3sVq5NP9e7yGAiTJU&s=FLliCLwqxudgCchv5BCSfVP-J7BhHgTh4n7QZlioHSc&e=" target="_blank" rel="noreferrer">https://askubuntu.com/questions/462968/take-changes-in-file-sshd-config-file-without-server-reboot</a><br>
</p>
<div>On 9/28/2019 11:22 AM, Indranil mal
wrote:<br>
</div>
<blockquote type="cite">
<div dir="auto">
<div>Sir I have tried with " SetEnv * " Still nothing is
coming with echo commad and user name by mistake I posted
wrong Otherwise no issue with user name and I have set the
parallel options file taksset "no" and remote options are 1
1 in server and client machines. </div>
<div dir="auto"><br>
<br>
<div class="gmail_quote" dir="auto">
<div dir="ltr" class="gmail_attr">On Sat, 28 Sep 2019
11:36 Gavin Abo, <<a href="mailto:gsabo@crimson.ua.edu" target="_blank" rel="noreferrer">gsabo@crimson.ua.edu</a>>
wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div bgcolor="#FFFFFF">
<blockquote type="cite">
<div dir="ltr">
<div>Respected Sir, In my linux(Ubuntu 18.04 LTS)
in ssh_config, and in sshd_config there are two
line already "SendEnv LANG LC_*" "AcceptEnv LANG
LC_*" respectively. </div>
</div>
</blockquote>
<p><font color="#000099">The "LANG LC_*" probably only
puts just the local language variables in the
remote environment. Did you follow the previous
advice [1] of trying to use "*" to put all
variables from the local environment?</font></p>
<p><font color="#000099">[1] <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__www.mail-2Darchive.com_wien-40zeus.theochem.tuwien.ac.at_msg19049.html&d=DwMFaQ&c=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws&r=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0&m=BP0kuacuLbCvaswrI8sq446rvs3sVq5NP9e7yGAiTJU&s=F2Kzs7Ld5paBoEnONGhjuu1Gkmmzcm97Ym-J9K4SEZI&e=" rel="noreferrer noreferrer" target="_blank">https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg19049.html</a><br>
</font></p>
<blockquote type="cite">
<div dir="ltr">
<div>However, ssh vsli1 'echo $WIENROOT' gives
nothing (blank).</div>
</div>
</blockquote>
<p><font color="#000099">That seems to be the main
cause of the problem as it should not return
(blank) but needs to return "/servernode1" as you
previously mentioned [2].</font></p>
<p><font color="#000099">[2] <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__www.mail-2Darchive.com_wien-40zeus.theochem.tuwien.ac.at_msg19036.html&d=DwMFaQ&c=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws&r=U_T4PL6jwANfAy4rnxTj8IUxm818jnvqKFdqWLwmqg0&m=BP0kuacuLbCvaswrI8sq446rvs3sVq5NP9e7yGAiTJU&s=vGl31Rca7NV32sDbba9qX9Fj6fpuj8KtDG8FBeL1emI&e=" rel="noreferrer noreferrer" target="_blank">https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg19036.html</a></font></p>
<p><font color="#000099">Perhaps the message below is
a clue. It you had set the WIENROOT variable in
.bashrc of your /home/vlsi accounts on each
system, you likely have to login and use that same
</font><font color="#000099"><font color="#000099">/home/vlsi
</font>account on the head node as the output
below seems to indicate login to a different
/home/niel account. Alternatively, setting the
WIENROOT variable in .bashrc of all /home/niel
accounts on each node might work too.</font><br>
</p>
<blockquote type="cite">
<div dir="ltr">
<div> The command ssh vsli1 'pwd $WIENROOT'
print "/home/vlsi" the common home directory and
<br>
</div>
<div>ssh vlsi1 "env"</div>
...<br>
USER=niel<br>
PWD=/home/niel<br>
HOME=/home/niel<br>
...<br>
<div>this is similar as server, and other nodes.</div>
<div><br>
</div>
<div>Sir After changing the parallel option file
in $WIENROOT in server to <br>
</div>
<div><br>
</div>
<div>setenv TASKSET <span style="color:rgb(255,0,0)"><b>"yes" from "no"</b></span><br>
if ( ! $?USE_REMOTE ) setenv USE_REMOTE 1<br>
if ( ! $?MPI_REMOTE ) setenv MPI_REMOTE 1<br>
setenv WIEN_GRANULARITY 1<br>
setenv DELAY 0.1<br>
setenv SLEEPY 1<br>
setenv WIEN_MPIRUN "mpirun -np _NP_ -machinefile
_HOSTS_ _EXEC_"<br>
setenv CORES_PER_NODE 1<br>
</div>
<div><br>
</div>
<div>the error is not coming but the program is
not increasing steps after lapw0 it stuck in
lapw1<br>
</div>
</div>
</blockquote>
<p><font color="#000099">Since it seemed to be
throwing an appropriate error message with TASKSET
previously unlike when set to "yes", probably you
should change it back to "no".</font><br>
</p>
</div>
</blockquote>
</div>
</div>
</div>
</blockquote>
</blockquote>
</div>
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