[Wien] forrtl: severe (174): SIGSEGV, segmentation fault occurred
Mahmoud Payami
mpayami at aeoi.org.ir
Wed Aug 18 11:39:54 CEST 2004
Dear Wien Users,
Kindly, I had compiled Wien2k-04 with all the default compiling and linking options but just changed the MKL address to the existing path.
My system is Ifort8+MKL70.
The compilation proceeds without any error. However, running the program for non paralell TiC example the following error appears:
---------------------------------------------
LAPW0 END
LAPW1 END
LAPW2 END
CORE END
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
mixer 080E2455 Unknown Unknown Unknown
mixer 080E3196 Unknown Unknown Unknown
mixer 0807CF49 Unknown Unknown Unknown
mixer 08064ABB Unknown Unknown Unknown
mixer 08064582 Unknown Unknown Unknown
mixer 08048C3C Unknown Unknown Unknown
Stack trace terminated abnormally.
------------------------------------------------------
For the stack problem, I have added the line "ulimit -s unlimited" in the ".bash_profile" so that the stack size origin has been excluded(?).
I had encountered such problem before and sent to ML but I received no answer.
In parallel mode, the error is converted to the following message:
----------------------
LAPW0 END
LAPW1 END
0.48user 0.08system 0:00.57elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6736minor)pagefaults 0swaps
LAPW1 END
0.50user 0.08system 0:00.60elapsed 97%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6374minor)pagefaults 0swaps
LAPW1 END
0.24user 0.03system 0:00.27elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5420minor)pagefaults 0swaps
LAPW1 END
0.23user 0.04system 0:00.27elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5415minor)pagefaults 0swaps
Warning: No xauth data; using fake authentication data for X11 forwarding.
LAPW1 END
/usr/X11R6/bin/xauth: error in locking authority file /home/mahmoud/.Xauthority
0.51user 0.10system 0:07.19elapsed 8%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (39major+6636minor)pagefaults 0swaps
LAPW1 END
0.55user 0.08system 0:07.48elapsed 8%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6702minor)pagefaults 0swaps
LAPW1 END
0.24user 0.03system 0:00.28elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5415minor)pagefaults 0swaps
LAPW1 END
0.24user 0.03system 0:00.28elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5412minor)pagefaults 0swaps
LAPW1 END
0.48user 0.09system 0:10.96elapsed 5%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (40major+6630minor)pagefaults 0swaps
LAPW1 END
LAPW1 END
0.48user 0.09system 0:09.44elapsed 6%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (39major+6262minor)pagefaults 0swaps
0.47user 0.09system 0:08.08elapsed 7%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6678minor)pagefaults 0swaps
LAPW1 END
0.49user 0.09system 0:07.63elapsed 7%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6604minor)pagefaults 0swaps
LAPW1 END
0.50user 0.10system 0:07.68elapsed 8%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (39major+6626minor)pagefaults 0swaps
LAPW1 END
0.52user 0.08system 0:05.65elapsed 10%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+6307minor)pagefaults 0swaps
/usr/X11R6/bin/xauth: error in locking authority file /home/mahmoud/.Xauthority
LAPW1 END
0.26user 0.04system 0:01.21elapsed 25%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5413minor)pagefaults 0swaps
LAPW1 END
0.28user 0.04system 0:01.20elapsed 27%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5423minor)pagefaults 0swaps
LAPW1 END
0.24user 0.03system 0:00.91elapsed 30%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+5413minor)pagefaults 0swaps
LAPW2 - FERMI; weighs written
LAPW2 END
0.20user 0.02system 0:00.23elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1229minor)pagefaults 0swaps
LAPW2 END
0.21user 0.02system 0:00.24elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1258minor)pagefaults 0swaps
LAPW2 END
0.08user 0.03system 0:00.11elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1225minor)pagefaults 0swaps
LAPW2 END
0.10user 0.03system 0:00.13elapsed 96%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1244minor)pagefaults 0swaps
LAPW2 END
0.09user 0.02system 0:00.11elapsed 98%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1170minor)pagefaults 0swaps
LAPW2 END
0.08user 0.02system 0:00.11elapsed 99%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1151minor)pagefaults 0swaps
forrtl: severe (24): end-of-file during read, unit 10, file /tmp/TiC-parralel.vector_15
Image PC Routine Line Source
lapw2 0813B543 Unknown Unknown Unknown
lapw2 081127AB Unknown Unknown Unknown
lapw2 08112C52 Unknown Unknown Unknown
lapw2 0812429B Unknown Unknown Unknown
lapw2 08051C10 Unknown Unknown Unknown
Stack trace terminated abnormally.
Command exited with non-zero status 24
0.00user 0.00system 0:00.00elapsed 75%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+365minor)pagefaults 0swaps
forrtl: severe (24): end-of-file during read, unit 10, file /tmp/TiC-parralel.vector_16
Image PC Routine Line Source
lapw2 0813B543 Unknown Unknown Unknown
lapw2 081127AB Unknown Unknown Unknown
lapw2 08112C52 Unknown Unknown Unknown
lapw2 0812429B Unknown Unknown Unknown
lapw2 08051C10 Unknown Unknown Unknown
Stack trace terminated abnormally.
Command exited with non-zero status 24
0.00user 0.00system 0:00.00elapsed 75%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+368minor)pagefaults 0swaps
forrtl: severe (24): end-of-file during read, unit 10, file /tmp/TiC-parralel.vector_17
Image PC Routine Line Source
lapw2 0813B543 Unknown Unknown Unknown
lapw2 081127AB Unknown Unknown Unknown
lapw2 08112C52 Unknown Unknown Unknown
lapw2 0812429B Unknown Unknown Unknown
lapw2 08051C10 Unknown Unknown Unknown
Stack trace terminated abnormally.
Command exited with non-zero status 24
0.00user 0.00system 0:00.00elapsed 75%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+366minor)pagefaults 0swaps
LAPW2 END
0.24user 0.17system 0:37.55elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (25major+1233minor)pagefaults 0swaps
LAPW2 END
0.22user 0.16system 0:38.36elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1259minor)pagefaults 0swaps
LAPW2 END
0.22user 0.16system 0:39.25elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (24major+1285minor)pagefaults 0swaps
LAPW2 END
0.23user 0.16system 0:37.25elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1262minor)pagefaults 0swaps
LAPW2 END
0.22user 0.17system 0:41.66elapsed 0%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (25major+1203minor)pagefaults 0swaps
LAPW2 END
0.24user 0.18system 0:39.14elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1308minor)pagefaults 0swaps
LAPW2 END
0.27user 0.18system 0:35.88elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (0major+1258minor)pagefaults 0swaps
LAPW2 END
0.29user 0.17system 0:37.81elapsed 1%CPU (0avgtext+0avgdata 0maxresident)k
0inputs+0outputs (25major+1234minor)pagefaults 0swaps
cp: cannot stat `.in.tmp': No such file or directory
rm: cannot remove `.in.tmp': No such file or directory
rm: cannot remove `.in.tmp1': No such file or directory
----------------------------------------------------------
Laurence Marks had drawn our attention to the origins of unknown errors due to inconsistent optimisations in the compilation and linking steps which was mentiond at:
http://support.intel.com/support/performancetools/fortran/linux/sb/CS-007800.htm
I do not know if this is of such kind compilation problems. For information, the original executables work ok both in single machine and in parallel mode.
Any comments is highly appreciated.
With Best Regards,
Mahmoud Payami
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