[Wien] Anyone ever compiled with pessl before?
Jorissen Kevin
Kevin.Jorissen at ua.ac.be
Tue Mar 23 09:30:35 CET 2004
The machines-file you describe is suited only for fine grain. For k-point, you'll have to write 32 lines, each corresponding to one processor ;-)
If you still have more k-points than processors, k-point parallellization is normally most efficient. Only for very big systems, where there are just a few (or one) k-point, and where very large matrix sizes are necessary, fine grain par. is necessary.
Kevin.
-----Oorspronkelijk bericht-----
Van: Chiung-Yuan Lin [mailto:cylin at buphy.bu.edu]
Verzonden: ma 3/22/2004 11:22
Aan: wien at zeus.theochem.tuwien.ac.at
CC:
Onderwerp: [Wien] Anyone ever compiled with pessl before?
Dear all,
First I would like to thank Vladimir's advice on PESSL and SCALAPACK.
Here I have other questions:
i) Can I run k-point parallelization (a 4000-k-point case) on
a single queue (with 32 processors) of our machine? If yes, do I make
my .machines file
1:hostname:32
and then x run_lapw -c -p? Are any other commands like granularity or
extrafine recommended in my .machines file?
ii) For fine grained parallelization, do I make the same .machines file
as i)? The command x run_lapw -c -p seems to initialize k-point
parallelization. Is there a way to run fine grained using run_lapw,
or I must use some other ways to initialize fine grained?
I ask because I want to know which paralleliztion scheme (purely fine
grained or purely k-point parallelization) makes my case run faster?
Thank you
Chiung-Yuan
Vladimir Timoshevskii wrote:
>
> Dear Chiung-Yuan,
>
> We have here IBM-SP4 machine with PESSL, and we tried to compile a
> parallel version.
> Unfortunately, PESSL is not completely compatible with SCALAPACK (on the
> MPI level). You need either to change the code yourself, or to compile
> the standard SCALAPACK.
> However, standard scalapack appeared to be not very efficient for IBM.
>
> Good luck,
> Vladimir.
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