[Wien] 'SECLR4' - SYEVX
Robertson Burgess
Robertson.Burgess at newcastle.edu.au
Tue Mar 13 01:08:46 CET 2007
Thanks Peter,
Modifying my .machines file as you recommended fixe the problem
entirely.
I am actually using a larger k-list than 8, the terminology used in the
jobscript file was that used in the sample jobscript file which I
edited, and I chose to keep it.
Bob Burgess
University of Newcastle
>>> Peter Blaha <pblaha at theochem.tuwien.ac.at> 03/12/07 6:29 PM >>>
a) Maybe NUME in param.inc_r/c of SRC_lapw1 needs to be incresed!
b) The emin/emax energy window is specified in Ry (not eV).
c) You are running a "medium size" calculations for a metallic system.
Thus you should have many k-points (more than your 8 ?) and
matrixsize/memory should be small enough to hold the H,S matrices in
memory on a single cpu. Therefore, you should definitely use the k-point
parallel version, not the fine-grain mpi-based parallel one !!
For this, your .machines file should NOT look like:
8:hostname:8
but contain 8 (identical) lines like
1:hostname
... (8 times)
This will span 8 lapw1 jobs, each one runs one k-point.
Eventually, on your Altix you set "shared memory" during siteconfig.
Robertson Burgess schrieb:
> Hi all,
> I'm running Wien2k/07 on an Altix Cluster on a Linux OS using a PBS
> queueing system. My structure is Aluminium slabs ranging from 5 to 15
> atoms thick. I succesfully run the SCF cycle through to completion on
> all the structures. I then modify the case.in1 to go up to higher
> energies than the default 2eV. Here's a sample of my case.in1 file
>
> WFFIL (WFPRI, SUPWF)
> 6.00 10 4 (R-MT*K-MAX; MAX L IN WF, V-NMT
> -.39071 4 0 global e-param with N other choices, napw
> 0 -0.443 0.000 CONT 1
> 1 -0.300 0.000 CONT 1
> 1 -4.866 0.002 CONT 1
> 2 -0.280 0.000 CONT 1
> -.39071 4 0 global e-param with N other choices, napw
> 0 -0.502 0.000 CONT 1
> 1 -0.355 0.000 CONT 1
> 1 -4.864 0.002 CONT 1
> 2 -0.274 0.000 CONT 1
> -.39071 4 0 global e-param with N other choices, napw
> 0 -0.507 0.000 CONT 1
> 1 -0.355 0.000 CONT 1
> 1 -4.866 0.002 CONT 1
> 2 -0.276 0.000 CONT 1
> -.39071 4 0 global e-param with N other choices, napw
> 0 -0.503 0.000 CONT 1
> 1 -0.354 0.000 CONT 1
> 1 -4.864 0.002 CONT 1
> 2 -0.274 0.000 CONT 1
> -.39071 4 0 global e-param with N other choices, napw
> 0 -0.505 0.000 CONT 1
> 1 -0.353 0.000 CONT 1
> 1 -4.865 0.002 CONT 1
> 2 -0.280 0.000 CONT 1
> K-VECTORS FROM UNIT:4 -9.0 5.0 emin/emax window
>
> I then run the following jobscript file.
>
> #!/bin/bash
> #PBS -l walltime=12:00:00
> #PBS -l vmem=8000MB
> #PBS -l jobfs=2000MB
> #PBS -l software=wien2k
> #PBS -l ncpus=8
> #PBS -wd
>
> module load wien2k/07
> export SCRATCH=$PBS_JOBFS
> export MPI_GROUP_MAX=128
>
> KPOINTS=8
>
> echo $KPOINTS:`hostname`:$PBS_NCPUS > .machines
> x lapw1 -p
> x lapw2 -fermi
> x optic -p
>
>
> LAPW1 then crashes with the following message
> ** Error in Parallel LAPW1
> ** LAPW1 STOPPED at Mon Mar 12 09:25:42 EST 2007
> ** check ERROR FILES!
> SEP INFO = 5
> 'SECLR4' - SYEVX (Scalapack/LAPACK) failed.
>
> This only happens on parallel processes, and the error can be avoided
by
> reducing the energy parameters on the last line of case.in1. For
> instance, I get the error with a 6 atom slab going from -9 to 7 eV,
but
> not -9 to 5 eV. Can anyone help me out with this?
> I've looked in the mailing list, and I find a lot of references to a
> 'SECLR4' - POTRF error but not this one.
>
> Thanks
> Bob Burgess
> University of Newcastle
>
> _______________________________________________
> Wien mailing list
> Wien at zeus.theochem.tuwien.ac.at
> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
--
P.Blaha
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Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060 Vienna
Phone: +43-1-58801-15671 FAX: +43-1-58801-15698
Email: blaha at theochem.tuwien.ac.at WWW:
http://info.tuwien.ac.at/theochem/
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