[Wien] Error at lapw1 cycle

Laurence Marks L-marks at northwestern.edu
Mon Nov 28 16:00:27 CET 2011


You will see from the mailing list (e.g.
http://zeus.theochem.tuwien.ac.at/pipermail/wien/2011-November/015651.html
) that there is an issue with some of the recent versions of ifort,
and by the looks of it the version you are using won't work.

One comment. if you do a google search on "free(): invalid next size"
you will see that this is a memory problem.

2011/11/28 EGUCHI Gaku <geguchi at scphys.kyoto-u.ac.jp>:
> Hello All,
>
> Recently I reinstalled WIEN2k_v11 with the latest ifort and icc
> (composer_xe_2011_sp1.7.256), or the ifort and gcc to Ubuntu 11.04,
> and consequently I've fallen into suffering from the following error
> at the SRC run. Is this also the problem for the compiler, which is
> difficult to deal with for the beginner?
>
> The installation has done without any problem. I executed everything
> in bash and the setting by userconfig_lapw is done to .bashrc.
>
> I'm happy if I could keep using ifort because of the simplicity of the
> installation.
>
> Best,
> Gaku Eguchi
>
> -----------
>  LAPW0 END
> *** glibc detected *** /home/parallels/Downloads/wien2k_v11/lapw1c: free():
> invalid next size (normal): 0x00000000024e8f40 ***
> ======= Backtrace: =========
> /lib/x86_64-linux-gnu/libc.so.6(+0x78a8f)[0x2b5847c4aa8f]
> /lib/x86_64-linux-gnu/libc.so.6(cfree+0x73)[0x2b5847c4e8e3]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x4a8d0c]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x465a9a]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x40e828]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x442bf3]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x404ccc]
> /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xff)[0x2b5847bf0eff]
> /home/parallels/Downloads/wien2k_v11/lapw1c[0x404bc9]
> ======= Memory map: ========
> 00400000-005a6000 r-xp 00000000 08:01 1580323
> /home/parallels/Downloads/wien2k_v11/lapw1c
> 007a5000-007b4000 rw-p 001a5000 08:01 1580323
> /home/parallels/Downloads/wien2k_v11/lapw1c
> 007b4000-00a3d000 rw-p 00000000 00:00 0
> 0221c000-033ae000 rw-p 00000000 00:00 0
> [heap]
> 2b58447dd000-2b58447fe000 r-xp 00000000 08:01 3673832
> /lib/x86_64-linux-gnu/ld-2.13.so
> 2b58447fe000-2b5844800000 rw-p 00000000 00:00 0
> 2b58449fd000-2b58449fe000 r--p 00020000 08:01 3673832
> /lib/x86_64-linux-gnu/ld-2.13.so
> 2b58449fe000-2b5844a00000 rw-p 00021000 08:01 3673832
> /lib/x86_64-linux-gnu/ld-2.13.so
> 2b5844a00000-2b5844f8e000 r-xp 00000000 08:01 797568
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_lp64.so
> 2b5844f8e000-2b584518e000 ---p 0058e000 08:01 797568
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_lp64.so
> 2b584518e000-2b584519c000 rw-p 0058e000 08:01 797568
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_lp64.so
> 2b584519c000-2b58451a2000 rw-p 00000000 00:00 0
> 2b58451a2000-2b5845e9a000 r-xp 00000000 08:01 797580
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_thread.so
> 2b5845e9a000-2b5846099000 ---p 00cf8000 08:01 797580
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_thread.so
> 2b5846099000-2b58461f1000 rw-p 00cf7000 08:01 797580
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_intel_thread.so
> 2b58461f1000-2b58461f4000 rw-p 00000000 00:00 0
> 2b58461f4000-2b584700b000 r-xp 00000000 08:01 795641
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_core.so
> 2b584700b000-2b584720a000 ---p 00e17000 08:01 795641
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_core.so
> 2b584720a000-2b584721e000 rw-p 00e16000 08:01 795641
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_core.so
> 2b584721e000-2b584722e000 rw-p 00000000 00:00 0
> 2b584723d000-2b5847255000 r-xp 00000000 08:01 3673910
> /lib/x86_64-linux-gnu/libpthread-2.13.so
> 2b5847255000-2b5847455000 ---p 00018000 08:01 3673910
> /lib/x86_64-linux-gnu/libpthread-2.13.so
> 2b5847455000-2b5847456000 r--p 00018000 08:01 3673910
> /lib/x86_64-linux-gnu/libpthread-2.13.so
> 2b5847456000-2b5847457000 rw-p 00019000 08:01 3673910
> /lib/x86_64-linux-gnu/libpthread-2.13.so
> 2b5847457000-2b584745c000 rw-p 00000000 00:00 0
> 2b584745c000-2b58474e0000 r-xp 00000000 08:01 3673882
> /lib/x86_64-linux-gnu/libm-2.13.so
> 2b58474e0000-2b58476df000 ---p 00084000 08:01 3673882
> /lib/x86_64-linux-gnu/libm-2.13.so
> 2b58476df000-2b58476e0000 r--p 00083000 08:01 3673882
> /lib/x86_64-linux-gnu/libm-2.13.so
> 2b58476e0000-2b58476e1000 rw-p 00084000 08:01 3673882
> /lib/x86_64-linux-gnu/libm-2.13.so
> 2b58476e1000-2b58477ad000 r-xp 00000000 08:01 786493
> /opt/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libiomp5.so
> 2b58477ad000-2b58479ac000 ---p 000cc000 08:01 786493
> /opt/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libiomp5.so
> 2b58479ac000-2b58479b6000 rw-p 000cb000 08:01 786493
> /opt/intel/composer_xe_2011_sp1.7.256/compiler/lib/intel64/libiomp5.so
> 2b58479b6000-2b58479cd000 rw-p 00000000 00:00 0
> 2b58479cd000-2b58479cf000 r-xp 00000000 08:01 3673855
> /lib/x86_64-linux-gnu/libdl-2.13.so
> 2b58479cf000-2b5847bcf000 ---p 00002000 08:01 3673855
> /lib/x86_64-linux-gnu/libdl-2.13.so
> 2b5847bcf000-2b5847bd0000 r--p 00002000 08:01 3673855
> /lib/x86_64-linux-gnu/libdl-2.13.so
> 2b5847bd0000-2b5847bd1000 rw-p 00003000 08:01 3673855
> /lib/x86_64-linux-gnu/libdl-2.13.so
> 2b5847bd1000-2b5847bd2000 rw-p 00000000 00:00 0
> 2b5847bd2000-2b5847d5c000 r-xp 00000000 08:01 3673845
> /lib/x86_64-linux-gnu/libc-2.13.so
> 2b5847d5c000-2b5847f5b000 ---p 0018a000 08:01 3673845
> /lib/x86_64-linux-gnu/libc-2.13.so
> 2b5847f5b000-2b5847f5f000 r--p 00189000 08:01 3673845
> /lib/x86_64-linux-gnu/libc-2.13.so
> 2b5847f5f000-2b5847f60000 rw-p 0018d000 08:01 3673845
> /lib/x86_64-linux-gnu/libc-2.13.so
> 2b5847f60000-2b5847f66000 rw-p 00000000 00:00 0
> 2b5847f66000-2b5847f7b000 r-xp 00000000 08:01 3673873
> /lib/x86_64-linux-gnu/libgcc_s.so.1
> 2b5847f7b000-2b584817a000 ---p 00015000 08:01 3673873
> /lib/x86_64-linux-gnu/libgcc_s.so.1
> 2b584817a000-2b584817b000 r--p 00014000 08:01 3673873
> /lib/x86_64-linux-gnu/libgcc_s.so.1
> 2b584817b000-2b584817c000 rw-p 00015000 08:01 3673873
> /lib/x86_64-linux-gnu/libgcc_s.so.1
> 2b584817c000-2b584817f000 rw-p 00000000 00:00 0
> 2b584817f000-2b5848788000 r-xp 00000000 08:01 797692
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_vml_avx.so
> 2b5848788000-2b5848988000 ---p 00609000 08:01 797692
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_vml_avx.so
> 2b5848988000-2b58489af000 rw-p 00609000 08:01 797692
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_vml_avx.so
> 2b58489af000-2b58489b0000 rw-p 00000000 00:00 0
> 2b5848a7f000-2b5848be7000 rw-p 00000000 00:00 0
> 2b58498ea000-2b584b206000 r-xp 00000000 08:01 795470
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_avx.so
> 2b584b206000-2b584b405000 ---p 0191c000 08:01 795470
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_avx.so
> 2b584b405000-2b584b41a000 rw-p 0191b000 08:01 795470
> /opt/intel/composer_xe_2011_sp1.7.256/mkl/lib/intel64/libmkl_avx.so
> 2b584b41a000-2b584b63c000 rw-p 00000000 00:00 0
> 2b584c000000-2b584c021000 rw-p 00000000 00:00 0
> 2b584c021000-2b5850000000 ---p 00000000 00:00 0
> 7fff9e4de000-7fff9e500000 rw-p 00000000 00:00 0
> [stack]
> 7fff9e54d000-7fff9e54e000 r-xp 00000000 00:00 0
> [vdso]
> ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0
> [vsyscall]
>
>>   stop error
>
> --
> ------------------------------------------------------------------------
> Gaku Eguchi
> Department of Physics, Graduate School of Science, Kyoto University
> Oiwake-cho, Kitashirakawa, Sakyou-ku, Kyoto 606-8502, Japan
> Laboratory  TEL   : +81-75-753-3744
> E-mail : geguchi at scphys.kyoto-u.ac.jp
> http://www.ss.scphys.kyoto-u.ac.jp/index.html.en
> ------------------------------------------------------------------------
>
> _______________________________________________
> Wien mailing list
> Wien at zeus.theochem.tuwien.ac.at
> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
>
>



-- 
Professor Laurence Marks
Department of Materials Science and Engineering
Northwestern University
www.numis.northwestern.edu 1-847-491-3996
"Research is to see what everybody else has seen, and to think what
nobody else has thought"
Albert Szent-Gyorgi


More information about the Wien mailing list