[Wien] Reg: k-point parallel submission of script to the HPC
Peter Blaha
pblaha at theochem.tuwien.ac.at
Fri Mar 9 08:28:57 CET 2012
You already got the answer previously:
The line:
echo $WIENROOT run_lapw -p -NI -ec .0000001 -I
does not execute anything.
Try out such a line in a terminal window.
If you want to use a "supercomputer", you need to learn some basic Linux.
Who wrote the nice script ? He should be able to teach you the meaning
of each line.
Am 09.03.2012 05:44, schrieb shwetha gummula:
> Dear Prof. Peter Blaha and Wien2k users,
>
> We are trying to submit k-point parallelization jobs to HPC through script file (qsub case.sh). It is showing job ID but it is not running (not showing any error). This
> mail I posted to wien2k user list earlier also but I didn't solved the problem yet. Please can any one help me regarding this. We are using WIEN2k 11.1 on Red Hat 5.6 version in
> our HPC. We have Intel 10 version Fortran compiler in our machine. Here I am attaching the script file.
>
> Thanking you
>
> Regards
> G.Shwetha
> shwetha.gummula at gmail.com <mailto:shwetha.gummula at gmail.com>
>
>
>
>
> On Tue, Mar 6, 2012 at 9:33 PM, shwetha gummula <shwetha.gummula at gmail.com <mailto:shwetha.gummula at gmail.com>> wrote:
>
>
>
> On Tue, Mar 6, 2012 at 8:01 PM, pascal boulet <pascal.boulet at univ-amu.fr <mailto:pascal.boulet at univ-amu.fr>> wrote:
>
> Dear G.Shwetha ,
>
> I might be wrong but the command in TiN.sh to submit the calculation
> looks wrong.
> My feeling is that you should substitute :
> $WIENROOT/run_lapw -p -NI -ec .0000001 -I
> for:
> echo $WIENROOT run_lapw -p -NI -ec .0000001 -I
>
> Best regards
> Pascal
>
> On 06/03/2012 10:27, shwetha gummula wrote:
> > Dear P.Blaha and Wien2k Users,
> >
> > We are using WIEN2k 11.1 on Red Hat 5.6 version in our HPC.
> > We have Intel 10 version Fortran compiler in our machine. We are
> > trying to submit the job using the PBS Script file for k-point
> > parallelization. When we submitting the job using qsub case.sh, it is
> > giving the job ID but in the status it is not showing any job ID (when
> > we give the command qstat). It is creating the machine file but it is
> > not showing any error in the error file and output file (it is not
> > creating any other files). I just want to know whether the job is
> > running or not, or whether it is problem with my script file?
> > But when I submit with the command mode on the terminal like : giving
> > run_lapw -ec 0.00001 it is working and creating other files.
> > Please, Can any one help to solve this problem.
> > Here I'm attaching the script file.
> > Thanking You
> >
> >
> > G.Shwetha
> > shwetha.gummula at gmail.com <mailto:shwetha.gummula at gmail.com> <mailto:shwetha.gummula at gmail.com <mailto:shwetha.gummula at gmail.com>>
> >
> >
> > _______________________________________________
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>
> --
> Pascal Boulet, PhD, computational chemist
> Aix-Marseille Université
> Laboratoire MADIREL
> Avenue Normandie-Niemen
> 13397 Marseille Cedex 20
> France
> **********
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> Fax. (+33) (0)413.55.18.50
> **********
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>
> Dear Pascal and Wien2k users,
> Thank you for your reply. We already tried by substituting echo $WIENROOT run_lapw -p -NI -ec .0000001 by $WIENROOT/run_lapw -p -NI -ec .0000001 -I but no
> change we observed.
> Thanking you
>
>
> Regards
> G.Shwetha
> shwetha.gummula at gmail.com <mailto:shwetha.gummula at gmail.com>
>
>
>
>
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--
P.Blaha
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Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060 Vienna
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