[Wien] Insufficient virtual memory - LAPW2
Salman Zarrini
salman.zarrini at tu-darmstadt.de
Mon Oct 14 16:33:16 CEST 2013
=================================================================
Dear Prof. Blaha,
Thank you for your answer, actually, there are no unlimited
restriction on the machines. I tested a sample case on multiple (a, b
and c) machines which have the same installation of WIEN2K-12 (OS and
software), they just differ in CPU, RAM and Diskspeed. The SCF was
converged successfully in machine "c" but it was crashed in the first
and third iteration of "a" and "b" machines respectively, because of
insufficient virtual memory. Convergence successfully in one machine
shows the input files are all right and there is no error in the
binaries/rights.
So, I was wondering why it works in one machine and not in the other.
Best regards,
Salman
=================================================================
a) 2 Socket, Dual Core AMD Opteron(tm) Processor 270, 8GB RAM
b) 2 Socket, (8Core) AMD Opteron(tm) Processor 6320, 64GB RAM
c) 2 Socket, (8Core(*2=HT)) Intel(R) Xeon(R) CPU E5-2680 0 @ 2.70GHz,
256GB RAM
$ ulimit -a
core file size (blocks, -c) 0
data seg size (kbytes, -d) unlimited
scheduling priority (-e) 0
file size (blocks, -f) unlimited
pending signals (-i) 515879
max locked memory (kbytes, -l) 64
max memory size (kbytes, -m) unlimited
open files (-n) 1024
pipe size (512 bytes, -p) 8
POSIX message queues (bytes, -q) 819200
real-time priority (-r) 0
stack size (kbytes, -s) unlimited
cpu time (seconds, -t) unlimited
max user processes (-u) 515879
virtual memory (kbytes, -v) unlimited
file locks (-x) unlimited
=================================================================
on machines (a) and (b) failed
(a) failed in the first iteration
(b) failed in the third iteration
the error message was:
forrtl: severe (41): insufficient virtual memory
Image PC Routine Line Source
lapw2 000000000053B8FA Unknown Unknown Unknown
lapw2 000000000053A475 Unknown Unknown Unknown
lapw2 00000000004E0646 Unknown Unknown Unknown
lapw2 000000000049D2F6 Unknown Unknown Unknown
lapw2 00000000004C69F6 Unknown Unknown Unknown
lapw2 000000000044A6EC fourir_ 112
fourir_tmp_.F
lapw2 0000000000475AD5 MAIN__ 595
lapw2_tmp_.F
lapw2 0000000000403FAC Unknown Unknown Unknown
libc.so.6 00002AB7F8770EAD Unknown Unknown Unknown
lapw2 0000000000403EA9 Unknown Unknown Unknown
stop error
========================================================================
> Message: 16
> Date: Tue, 08 Oct 2013 20:12:03 +0200
> From: Peter Blaha <pblaha at theochem.tuwien.ac.at>
> To: A Mailing list for WIEN2k users <wien at zeus.theochem.tuwien.ac.at>
> Subject: Re: [Wien] Insufficient virtual memory - LAPW2
> Message-ID: <52544AF3.6020700 at theochem.tuwien.ac.at>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Eventually your sysadmin (or a special Linux version) has restricted
> some resources for the users.
>
> Use limit or ulimit commands to find out/set these values or ask
> your sys-admin.
>
>
> Am 08.10.2013 18:54, schrieb Salman Zarrini:
>> ==========================================================================
>> Dear Wien2k user,
>>
>> Wien2k-12 is running in our machines which have enough memory as it is
>> clear below, however, all the jobs (even a very small one)are crashed in
>> LAPW2 either in k-point parallel or nonparallel mode thanks to
>> insufficient virtual memory. So, any helpful comments would be
>> appreciated in advance.
>>
>> Regards,
>> Salman
>>
>> ==============================================================================
>>
>>
>> forrtl: severe (41): insufficient virtual memory
>> Image PC Routine Line Source
>> lapw2 000000000053B8FA Unknown Unknown Unknown
>> lapw2 000000000053A475 Unknown Unknown Unknown
>> lapw2 00000000004E0646 Unknown Unknown Unknown
>> lapw2 000000000049D2F6 Unknown Unknown Unknown
>> lapw2 00000000004C69F6 Unknown
>>
>> _______________________________________________
>> Wien mailing list
>> Wien at zeus.theochem.tuwien.ac.at
>> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
>> SEARCH the MAILING-LIST at:
>> http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
>
> --
> Peter Blaha
> Inst.Materials Chemistry
> TU Vienna
> Getreidemarkt 9
> A-1060 Vienna
> Austria
> +43-1-5880115671
>
>
> ------------------------------
>
> Message: 17
> Date: Tue, 08 Oct 2013 20:12:42 +0200
> From: Peter Blaha <pblaha at theochem.tuwien.ac.at>
> To: A Mailing list for WIEN2k users <wien at zeus.theochem.tuwien.ac.at>
> Subject: Re: [Wien] Insufficient virtual memory - LAPW2
> Message-ID: <52544B1A.1090303 at theochem.tuwien.ac.at>
> Content-Type: text/plain; charset=ISO-8859-1; format=flowed
>
> Eventually your sysadmin (or a special Linux version) has restricted
> some resources for the users.
>
> Use limit or ulimit commands to find out/set these values or ask
> your sys-admin.
>
>
> Am 08.10.2013 18:54, schrieb Salman Zarrini:
>> ==========================================================================
>> Dear Wien2k user,
>>
>> Wien2k-12 is running in our machines which have enough memory as it is
>> clear below, however, all the jobs (even a very small one)are crashed in
>> LAPW2 either in k-point parallel or nonparallel mode thanks to
>> insufficient virtual memory. So, any helpful comments would be
>> appreciated in advance.
>>
>> Regards,
>> Salman
>>
>> ==============================================================================
>>
>>
>> forrtl: severe (41): insufficient virtual memory
>> Image PC Routine Line Source
>> lapw2 000000000053B8FA Unknown Unknown Unknown
>> lapw2 000000000053A475 Unknown Unknown Unknown
>> lapw2 00000000004E0646 Unknown Unknown Unknown
>> lapw2 000000000049D2F6 Unknown Unknown Unknown
>> lapw2 00000000004C69F6 Unknown Unknown Unknown
>> lapw2 000000000044A6EC fourir_ 112
>> fourir_tmp_.F
>> lapw2 0000000000475AD5 MAIN__ 595
>> lapw2_tmp_.F
>> lapw2 0000000000403FAC Unknown Unknown Unknown
>> libc.so.6 00002B45BB33EEAD Unknown Unknown Unknown
>> lapw2 0000000000403EA9 Unknown Unknown Unknown
>>
>> ==============================================================================
>>
>> cpuinfo: 2 cpu sockets with 8core - AMD Opteron(tm) Processor 6320
>> ==============================================================================
>>
>>
>> cat /proc/meminfo
>> MemTotal: 66094780 kB
>> MemFree: 60913536 kB
>> Buffers: 136360 kB
>> Cached: 3471304 kB
>> SwapCached: 0 kB
>> Active: 3727996 kB
>> Inactive: 1212544 kB
>> Active(anon): 1332968 kB
>> Inactive(anon): 287908 kB
>> Active(file): 2395028 kB
>> Inactive(file): 924636 kB
>> Unevictable: 192 kB
>> Mlocked: 192 kB
>> SwapTotal: 99143676 kB
>> SwapFree: 99143676 kB
>> Dirty: 63208 kB
>> Writeback: 0 kB
>> AnonPages: 1335024 kB
>> Mapped: 302476 kB
>> Shmem: 288016 kB
>> Slab: 64468 kB
>> SReclaimable: 38904 kB
>> SUnreclaim: 25564 kB
>> KernelStack: 1856 kB
>> PageTables: 15696 kB
>> NFS_Unstable: 0 kB
>> Bounce: 0 kB
>> WritebackTmp: 0 kB
>> CommitLimit: 132191064 kB
>> Committed_AS: 8457532 kB
>> VmallocTotal: 34359738367 kB
>> VmallocUsed: 409296 kB
>> VmallocChunk: 34309016104 kB
>> HardwareCorrupted: 0 kB
>> AnonHugePages: 0 kB
>> HugePages_Total: 0
>> HugePages_Free: 0
>> HugePages_Rsvd: 0
>> HugePages_Surp: 0
>> Hugepagesize: 2048 kB
>> DirectMap4k: 84544 kB
>> DirectMap2M: 5140480 kB
>> DirectMap1G: 61865984 kB
>> ==========================================================================
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