[Wien] Possible clash between different libiomp5.so library file
Lawal Mohammed
mohammedlawal08 at yahoo.com
Thu Jan 10 02:57:48 CET 2019
Dear Developers and Users,
I am facing a problem and need your help.The issue is an error when I submitted a job on cluster machine. The error message is:
Calculating Bismuthtest1 in /home/username/WIEN2k/Bismuthtest1on node5 with PID 21645using WIEN2k_18.2 (Release 17/7/2018) in /software/wien2k-18.2
start (Thu Jan 10 09:48:12 CST 2019) with lapw0 (100/99 to go)
cycle 1 (Thu Jan 10 09:48:12 CST 2019) (100/99 to go)
> lapw0 -p (09:48:12) starting parallel lapw0 at Thu Jan 10 09:48:12 CST 2019-------- .machine0 : processorsrunning lapw0 in single mode0.022u 0.036s 0:00.08 62.5% 0+0k 0+56io 0pf+0werror: command /software/wien2k-18.2/lapw0para lapw0.def failed> stop error
In the output file the error is:lapw0: relocation error: lapw0: symbol kmp_aligned_malloc, version VERSION not defined in file libiomp5.so with link time reference
grep: *scf1*: No such file or directory
grep: lapw2*.error: No such file or directory
Many thanks to Gavin for pointing out that the error was due to clash between other libraries with the Intel Fortran library. However, after I reported the issue, system admin confirmed that the environmental variables was okay. Any help to rectify this issue is highly appreciated.
I will provide addition information if needed.
Thanks alot for your time.With kind regards.
Lawal
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