[Wien] System configuration

Indranil mal indranil.mal at gmail.com
Wed May 29 19:25:29 CEST 2019


/home/dps/fftw3/lib/libfftw3_mpi.a(api.o): In function `bogosity_hook':
api.c:(.text+0x20): undefined reference to `ompi_mpi_comm_null'
api.c:(.text+0x44): undefined reference to `ompi_mpi_comm_null'
api.c:(.text+0x73): undefined reference to `ompi_mpi_comm_null'
/home/dps/fftw3/lib/libfftw3_mpi.a(api.o): In function `nowisdom_hook':
api.c:(.text+0x9d): undefined reference to `ompi_mpi_comm_null'
api.c:(.text+0xbc): undefined reference to `ompi_mpi_comm_null'
/home/dps/fftw3/lib/libfftw3_mpi.a(api.o):api.c:(.text+0xd3): more
undefined references to `ompi_mpi_comm_null' follow
/home/dps/fftw3/lib/libfftw3_mpi.a(api.o): In function `wisdom_ok_hook':
api.c:(.text+0x1cc): undefined reference to `ompi_mpi_unsigned'
api.c:(.text+0x21f): undefined reference to `ompi_mpi_op_land'
api.c:(.text+0x226): undefined reference to `ompi_mpi_int'
api.c:(.text+0x24b): undefined reference to `ompi_mpi_comm_null'
/home/dps/fftw3/lib/libfftw3_mpi.a(api.o): In function `cost_hook':
api.c:(.text+0x2c7): undefined reference to `ompi_mpi_comm_null'
api.c:(.text+0x2dc): undefined reference to `ompi_mpi_comm_null'
api.c:(.text+0x2ee): undefined reference to `ompi_mpi_op_max'
api.c:(.text+0x2f5): undefined reference to `ompi_mpi_op_sum'
api.c:(.text+0x308): undefined reference to `ompi_mpi_double'
api.c:(.text+0x33b): undefined reference to `ompi_mpi_comm_null'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o): In function
`fftw_mpi_local_size_many_transposed_f03':
f03-wrap.c:(.text+0x3a): undefined reference to `MPI_Comm_f2c'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o): In function
`fftw_mpi_local_size_many_f03':
f03-wrap.c:(.text+0xa5): undefined reference to `MPI_Comm_f2c'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o): In function
`fftw_mpi_local_size_transposed_f03':
f03-wrap.c:(.text+0x103): undefined reference to `MPI_Comm_f2c'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o): In function
`fftw_mpi_local_size_f03':
f03-wrap.c:(.text+0x148): undefined reference to `MPI_Comm_f2c'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o): In function
`fftw_mpi_local_size_many_1d_f03':
f03-wrap.c:(.text+0x1a2): undefined reference to `MPI_Comm_f2c'
/home/dps/fftw3/lib/libfftw3_mpi.a(f03-wrap.o):f03-wrap.c:(.text+0x20a):
more undefined references to `MPI_Comm_f2c' follow
/home/dps/fftw3/lib/libfftw3_mpi.a(transpose-alltoall.o): In function
`apply':
transpose-alltoall.c:(.text+0x83): undefined reference to `ompi_mpi_double'
transpose-alltoall.c:(.text+0x11f): undefined reference to `ompi_mpi_double'
transpose-alltoall.c:(.text+0x16d): undefined reference to `ompi_mpi_double'
transpose-alltoall.c:(.text+0x19f): undefined reference to `ompi_mpi_double'
/home/dps/fftw3/lib/libfftw3_mpi.a(transpose-pairwise.o): In function
`transpose_chunks':
transpose-pairwise.c:(.text+0x53a): undefined reference to `ompi_mpi_double'
/home/dps/fftw3/lib/libfftw3_mpi.a(transpose-pairwise.o):transpose-pairwise.c:(.text+0x54c):
more undefined references to `ompi_mpi_double' follow
/home/dps/fftw3/lib/libfftw3_mpi.a(any-true.o): In function
`fftw_mpi_any_true':
any-true.c:(.text+0xa): undefined reference to `ompi_mpi_op_lor'
any-true.c:(.text+0x1f): undefined reference to `ompi_mpi_int'
/home/dps/fftw3/lib/libfftw3_mpi.a(wisdom-api.o): In function
`fftw_mpi_gather_wisdom':
wisdom-api.c:(.text+0x92): undefined reference to `ompi_mpi_unsigned_long'
wisdom-api.c:(.text+0xcd): undefined reference to `ompi_mpi_char'
wisdom-api.c:(.text+0x12d): undefined reference to `ompi_mpi_unsigned_long'
wisdom-api.c:(.text+0x158): undefined reference to `ompi_mpi_char'
/home/dps/fftw3/lib/libfftw3_mpi.a(wisdom-api.o): In function
`fftw_mpi_broadcast_wisdom':
wisdom-api.c:(.text+0x222): undefined reference to `ompi_mpi_unsigned_long'
wisdom-api.c:(.text+0x24d): undefined reference to `ompi_mpi_char'
wisdom-api.c:(.text+0x2b5): undefined reference to `ompi_mpi_unsigned_long'
wisdom-api.c:(.text+0x2da): undefined reference to `ompi_mpi_char'
Makefile:117: recipe for target 'nlvdw_mpi' failed
make[1]: *** [nlvdw_mpi] Error 1
make[1]: Leaving directory '/home/dps/WIEN2K/SRC_nlvdw'
Makefile:108: recipe for target 'para' failed
make: *** [para] Error 2

On Wed, May 29, 2019 at 5:34 PM Gavin Abo <gsabo at crimson.ua.edu> wrote:

> Look inside those compile.msg files as they likely contain messages
> showing why they failed to compile.
> On 5/28/2019 11:46 AM, Indranil mal wrote:
>
> Thank you for kind response
> After following all the instructions given by you I have installed WIEN2k
> with Intel parallel compiler. After compiling I got
>
> Compile time errors (if any) were:
> SRC_lapw0/compile.msg:make[1]: *** [lapw0_mpi] Error 1
> SRC_lapw0/compile.msg:make: *** [para] Error 2
> SRC_nlvdw/compile.msg:make[1]: *** [nlvdw_mpi] Error 1
>
>
> _______________________________________________
> Wien mailing list
> Wien at zeus.theochem.tuwien.ac.at
> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien
> SEARCH the MAILING-LIST at:
> http://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/index.html
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://zeus.theochem.tuwien.ac.at/pipermail/wien/attachments/20190529/9cdaff85/attachment-0001.html>


More information about the Wien mailing list