[Wien] lapw2 crashed error

Gavin Abo gsabo at crimson.ua.edu
Wed Nov 27 17:24:43 CET 2019


If the "Command not found" is not from the sed command itself, it might 
be caused by the arguments to the sed command.  However, it cannot be 
determined what the cause and solution is unless the script and line 
with the sed command is identified.

If you can provide information on the computing system, perhaps someone 
will encounter the same problem or be able to reproduce it.

Linux version (example, Ubuntu 18.04.3):

sed version (example, output of command 'sed --version' [1]):

tcsh version (example, output of command 'dpkg -l tcsh' [2]):

csh version (example, output of command 'dpkg -l csh' [3]):

WIEN2k version (example, output of command 'cat WIEN2k_VERSION' [4]):

Did you just check 'sed' in your user account?  Since you are doing 
parallel, did you also check if sed works when you login to your nodes 
(which appears to be 'ssh localhost' in your case)?  If you use root, 
su, or sudo for running WIEN2k, I suggest use of the user account 
instead and not those unless your experienced with that as those 
administrative environments can sometimes behave differently with 
unexpected consequences [5].

[1] http://manpages.ubuntu.com/manpages/trusty/man1/sed.1.html
[2] 
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg18018.html
[3] 
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg16030.html
[4] 
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg18956.html
[5] 
https://www.mail-archive.com/wien@zeus.theochem.tuwien.ac.at/msg10594.html

On 11/27/2019 4:32 AM, Peeyush kumar kamlesh wrote:
> Thank you all !
> The problem is solved by running the same command with using 
> additional flag "-NI".
> Dear Gavin Sir, 'sed' is already installed, still it showed *"sed: 
> Command not found".
> *
>
> On Tue, Nov 26, 2019 at 5:53 AM Peeyush kumar kamlesh 
> <peeyush.physik.rku at gmail.com <mailto:peeyush.physik.rku at gmail.com>> 
> wrote:
>
>     Sir,
>     I am using single node of four cores. Mu machine file is below:
>     __________________________________________
>     100:localhost
>     100:localhost
>     100:localhost
>     100:localhost
>     granularity:1
>     extrafine:1
>     omp_global:4
>     --------------------------------------------------------
>
>     On Mon, Nov 25, 2019 at 10:06 PM Peeyush kumar kamlesh
>     <peeyush.physik.rku at gmail.com
>     <mailto:peeyush.physik.rku at gmail.com>> wrote:
>
>         Hello Wien2k user,
>         Greetings!
>         I am running scf cycle with hf potential. When I run the
>         command "run_lapw -hf -p", then after successful completion of
>         7 cycles, I found error in cycle 8. In terminal it is
>         represented as follows:
>         ____________________________________________________
>         in cycle 8    ETEST: .0004919150000000   CTEST: .0035867
>         hup: Command not found.
>          LAPW0 END
>          LAPW0 END
>          LAPW1 END
>          LAPW1 END
>          LAPW1 END
>          LAPW1 END
>         sed: Command not found.
>         LAPW2 - Error. Check file lapw2.error
>         cp: cannot stat '.in.tmp': No such file or directory
>
>         >   stop error
>         ------------------------------------------------------------------------------
>
>         When I checked lapw2.error file I found following details:
>         _____________________________________________________
>         'LAPW2' - can't open unit: 10
>          'LAPW2' -        filename: /case.vector
>          'LAPW2' -          status: unknown      form: unformatted
>         **  testerror: Error in Parallel LAPW2
>         ---------------------------------------------------------------------------------------
>
>         I also tried to search and understand the previous threads,
>         but I was unable to do so. Kindly suggest me why this error is
>         appearing and how can it be resolved?
>
>         Thanks and Regards
>         Peeyush Kumar Kamlesh
>
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