[Wien] parallel ssh error

Peter Blaha pblaha at theochem.tuwien.ac.at
Thu Sep 26 09:57:28 CEST 2019


First of all, one of the errors was: lapw1c: command not found

You showed us only the existence of "lapw1", not "lapw1c" with the ls 
commands.

However, since you also have:  fixerror_lapw: command not found

I don't think that this is the problem.

-------------
I'm more concerned about the different usernames/owners of lapw1 on 
different computers.
It is not important who owns $WIENROOT/*, as long as everybody has r-x 
permissions.

However, what is your username and your home-directory on the different 
machines ? It must be the same ! And do you have access to the actual 
working directory ?
In what directory did you start the calculations?
Is it a directory called "Parallel" ? What is the full path of that on 
every computer (/casenode1/Parallel ?)
----------------------

First check would be:

On vlsi1 change into the working directory (Parallel ?) and run one 
iteration without parallelization:   run -i 1

then login to   ssh vsli2 (passwordless), cd into "Parallel" and do 
another non-parallel cycle.  Does it work ?
-----------


On 9/26/19 11:48 AM, Indranil mal wrote:
> Dear developers and users
>                                          I have 5 individual Linux 
> (Ubuntu) pc with intel i7 octa core processors and 16GB RAM in each 
> connected via a 1GBps LAN.  password less ssh working properly. I have 
> installed WIEN2K 19 in the one machine (M1 server) in the directory 
> "/servernode1" and the case directory is "/casenode1"  and through NFS I 
> have mounted the "servernode1", and "casenode1" in other four pcs with 
> same name local folders ("servernode1", and "casenode1") in them. I have 
> installed ,intel compilers, libxc, fftw, elpa in all the nodes 
> individually. I have manually edited the bash file  $WIENROOT path and 
> case directory and the WIEN2K options file. Keep all the value same in 
> all the client nodes as it is in the server node.
> 
> alias cdw="cd /casenode1"
> export OMP_NUM_THREADS=4
> #export LD_LIBRARY_PATH=.....
> export EDITOR="emacs"
> export SCRATCH=./
> export WIENROOT=/servernode1
> export W2WEB_CASE_BASEDIR=/casenode1
> export STRUCTEDIT_PATH=$WIENROOT/SRC_structeditor/bin
> 
> Now when I am doing parallel calculations with all the client nodes in 
> machine file ,
> # k-points are left, they will be distributed to the residual-machine_name.
> #
> 1:vlsi1
> 1:vlsi2
> 1:vlsi3
> 1:vlsi4
> 
> granularity:1
> extrafine:1
> #
> 
> 
> and getting the following error
> 
> grep: *scf1*: No such file or directory
> cp: cannot stat '.in.tmp': No such file or directory
> FERMI - Error
> grep: *scf1*: No such file or directory
> Parallel.scf1_1: No such file or directory.
> bash: fixerror_lapw: command not found
> bash: lapw1c: command not found
> bash: fixerror_lapw: command not found
> bash: lapw1c: command not found
>   LAPW0 END
> hup: Command not found.
> 
> ###################Error file lapw2 error
>   'LAPW2' - can't open unit: 30
>   'LAPW2' -        filename: Parallel.energy_1
> **  testerror: Error in Parallel LAPW2
> 
> I have checked the with " ls -l $WIENROOT/lapw1" as suggested in the 
> previous mailing list and got the
> -rwxr-xr-x 1 vlsi vlsi 2139552 Sep 26 02:41 /servernode1/lapw1 for 
> server (vlsi is the user name in server)
> -rwxr-xr-x 1 vlsi1 vlsi1 2139552 Sep 26 02:41 /servernode1/lapw1 (in 
> node1 the user name is vlsi1)
> -rwxr-xr-x 1 vlsi2 vlsi2 2139552 Sep 26 02:41 /servernode1/lapw1 (in 
> node2 the user name is vlsi2)
> please help
> 
> 
> thanking you
> Indranil
> 
> 
> 
> 
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> 

-- 

                                       P.Blaha
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Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060 Vienna
Phone: +43-1-58801-165300             FAX: +43-1-58801-165982
Email: blaha at theochem.tuwien.ac.at    WIEN2k: http://www.wien2k.at
WWW:   http://www.imc.tuwien.ac.at/TC_Blaha
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