[Wien] Fwd: Installation issue

Indranil mal indranil.mal at gmail.com
Tue Apr 30 07:11:13 CEST 2019


yes sir. still the problem is there. No issue sir I can manually see the
structures.


Thanking you
Indranil

On Mon, Apr 29, 2019 at 8:37 PM Peter Blaha <pblaha at theochem.tuwien.ac.at>
wrote:

> Did you do the killing and restart of w2web ???
>
> Am 29.04.2019 um 14:24 schrieb Indranil mal:
> > By using the command line "xcrysden --wien_struct case.struct" I can see
> > the structures and the view structure button is also showing in w2web.
> > But When click on the view structure button "Requires X-Windows system
> > ... " message is coming.
> >
> > Thanking you
> >
> > Indranil
> >
> > On Fri, Apr 26, 2019 at 11:02 AM Peter Blaha
> > <pblaha at theochem.tuwien.ac.at <mailto:pblaha at theochem.tuwien.ac.at>>
> wrote:
> >
> >     change into a directory where you have a case.struct file.
> >     Can you open it using:
> >
> >     xcrysden --wien_struct case.struct
> >
> >     If yes, then xcrysden is properly installed. If you do  not see the
> >     view
> >     structure button in w2web, you have to kill w2web and restart it
> again:
> >
> >     ps -ef|grep w2web   #  this gives you the "PID" of w2web, a number on
> >     the left side
> >     kill PID            #
> >
> >     and repeat the ps command until you do not find w2web anymore. Then
> >     start w2web again by typing:
> >
> >     w2web
> >
> >     Regards
> >
> >     Am 26.04.2019 um 06:00 schrieb Indranil mal:
> >      > I have followed your suggestion and it is working except the
> >     xcrysden is
> >      > not linked, can not view structures.
> >      >
> >      > dps at dps-lab:~$ whereis xcrysden
> >      > xcrysden: /usr/bin/xcrysden /usr/lib/xcrysden /usr/share/xcrysden
> >      > /home/dps/WIEN2K/xcrysden /usr/share/man/man1/xcrysden.1.gz
> >      >
> >      > XCRYSDEN_TOPDIR=/usr/share/xcrysden
> >      > XCRYSDEN_SCRATCH=/home/dps/xcrys_tmp
> >      >
> >      > unable to edit the top directory. However I have installed
> >     xcrysden from
> >      > UBUNTU software library.
> >      >
> >      >
> >      > Thanking you
> >      >
> >      > Indranil
> >      >
> >      >
> >      > On Tue, Apr 23, 2019 at 6:41 PM Peter Blaha
> >      > <pblaha at theochem.tuwien.ac.at
> >     <mailto:pblaha at theochem.tuwien.ac.at>
> >     <mailto:pblaha at theochem.tuwien.ac.at
> >     <mailto:pblaha at theochem.tuwien.ac.at>>> wrote:
> >      >
> >      >     I suggest that you first do only the sequential installation.
> >      >
> >      >     For this (and for your hardware) you don't need mpi,
> >     scalapack or elpa.
> >      >
> >      >     Change into SRC_lapw0 and inspect the compile.msg file in
> >     more detail.
> >      >     You may see more informative messages then what you posted.
> >      >
> >      >     You can also recompile again simply by typing "make" in
> >     SRC_lapw0.
> >      >
> >      >     PS: If this was the only error in siteconfig after
> >     compilation of all
> >      >     programs, it might be your libxc installation. (remove
> >     -DLIBXC, and the
> >      >     corresponding includes and libraries in the Makefile of
> >     SRC_lapw0.
> >      >
> >      >     On 4/23/19 10:00 AM, Indranil mal wrote:
> >      >      > I am using a PC with intel i7 32GB RAM and 2TB HDD with
> >     UBUNTU 18.04
> >      >      > LTS. I have installed OpenBLAS-0.2.20 and using GNU
> >     FORTRAN and c
> >      >      > compiler and my settings for compiler/Linker , Libraries
> >     are as
> >      >     followed
> >      >      >
> >      >      >   Current settings:
> >      >      >    O   Compiler options:        -ffree-form -O2
> >      >     -ffree-line-length-none
> >      >      >    L   Linker Flags:            $(FOPT)
> >      >      >    P   Preprocessor flags       '-DParallel'
> >      >      >    R   R_LIBS (LAPACK+BLAS):    -llapack -lblas -lpthread
> >      >      >    X   LIBX options:            -DLIBXC -I/opt/etsf/include
> >      >      >        LIBXC-LIBS:              -L/opt/etsf/lib/ -lxcf03
> -lxc
> >      >      >
> >      >      > I have installed FFTW3 and mpi but could not install ELPA
> >     getting
> >      >     the
> >      >      > error " No usable BLACS found. If installed in a
> >     non-standard place,
> >      >      > please specify suitable LDFLAGS and FCFLAGS as arguments to
> >      >     configure".
> >      >      > And that is why I did not configure the parallel computing.
> >      >      >
> >      >      > When I am trying to compile the getting the following
> >     error and
> >      >     attached
> >      >      > the compile.msg file. Please help me to install WIEN2K in
> >     my system.
> >      >      >
> >      >      > done.
> >      >      >
> >      >      > Compile time errors (if any) were:
> >      >      > SRC_lapw0/compile.msg:collect2: error: ld returned 1 exit
> >     status
> >      >      > SRC_lapw0/compile.msg:make[1]: *** [lapw0] Error 1
> >      >      > SRC_lapw0/compile.msg:make: *** [seq] Error 2
> >      >      >
> >      >      > Thanking you
> >      >      >
> >      >      > Indranil
> >      >      >
> >      >      >
> >      >      > _______________________________________________
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> >      >      >
> >      >
> >      >     --
> >      >
> >      >                                             P.Blaha
> >      >
> >
>  --------------------------------------------------------------------------
> >      >     Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060
> >     Vienna
> >      >     Phone: +43-1-58801-165300             FAX: +43-1-58801-165982
> >      >     Email: blaha at theochem.tuwien.ac.at
> >     <mailto:blaha at theochem.tuwien.ac.at>
> >      >     <mailto:blaha at theochem.tuwien.ac.at
> >     <mailto:blaha at theochem.tuwien.ac.at>>    WIEN2k:
> http://www.wien2k.at
> >      >     WWW: http://www.imc.tuwien.ac.at/TC_Blaha
> >      >
> >
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> >     --
> >
>  --------------------------------------------------------------------------
> >     Peter BLAHA, Inst.f. Materials Chemistry, TU Vienna, A-1060 Vienna
> >     Phone: +43-1-58801-165300             FAX: +43-1-58801-165982
> >     Email: blaha at theochem.tuwien.ac.at
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> >
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>
> --
> Peter Blaha
> Inst.Materials Chemistry
> TU Vienna
> Getreidemarkt 9
> A-1060 Vienna
> Austria
> +43-1-5880115671
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